Pre_GI: BLASTP Hits

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Query: NC_010498:1117938:1137015 Escherichia coli SMS-3-5, complete genome

Start: 1137015, End: 1137740, Length: 726

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Escherichia coli SMS-3-5 was isolated from a toxic-metal contaminated site, Shipyard Creek, Charleston, South Carolina, USA. This strain is highly resistant to a number of antibiotics. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
CP002797:4411763:441539844153984416117720Escherichia coli NA114, complete genomeFumarate respiration transcriptional regulator DcuR1e-68259
NC_010067:3247169:324716932471693247888720Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein7e-68256
NC_016856:4563435:456271945627194563438720Salmonella enterica subsp. enterica serovar Typhimurium str. 14028SDNA-binding transcriptional activator DcuR1e-67256
NC_011274:4385039:438432343843234385042720Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91DNA-binding transcriptional activator DcuR1e-67256
NC_011205:4564645:456392945639294564648720Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853DNA-binding transcriptional activator DcuR1e-67256
NC_011147:4297513:429679742967974297516720Salmonella enterica subsp. enterica serovar Paratyphi A strDNA-binding transcriptional activator DcuR1e-67256
NC_012214:2221702:226519922651992265918720Erwinia pyrifoliae Ep1/96, complete genomeResponse regulator in two-component regulatory system with DcuS8e-59226
NC_013971:1660144:166394316639431664662720Erwinia amylovora ATCC 49946 chromosome, complete genometwo-component response regulator3e-56218
NC_013961:1622616:162641516264151627134720Erwinia amylovora, complete genomeTranscriptional regulatory protein citT3e-56218
NC_014618:1809369:181313818131381813857720Enterobacter cloacae SCF1 chromosome, complete genomefused response regulator receiver/hypothetical protein4e-56218
NC_010694:2138000:217627121762712176990720Erwinia tasmaniensis, complete genomeResponse regulator in two-component regulatory system with DcuS2e-55215
NC_008800:2695977:270028527002852701004720Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,DNA-binding transcriptional activator DcuR1e-45183
NC_015566:2039431:206318320631832063902720Serratia sp. AS12 chromosome, complete genomeresponse regulator receiver and unknown domain-containing protein2e-45182
NC_015224:2701914:270701227070122707731720Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,DNA-binding transcriptional activator DcuR1e-45182
NC_020064:2728569:273017427301742730890717Serratia marcescens FGI94, complete genomeresponse regulator of citrate/malate metabolism4e-45181
NC_020211:2123819:214288721428872143606720Serratia marcescens WW4, complete genomeDNA-binding response regulator in two-component regulatory system with DcuS1e-44179
NC_012691:241404:241404241404242126723Tolumonas auensis DSM 9187, complete genomeresponse regulator receiver and unknown domain protein4e-41167
NC_008554:4839116:484597148459714846666696Syntrophobacter fumaroxidans MPOB, complete genomeresponse regulator receiver and unknown domain protein2e-28125
NC_009454:1389974:139536613953661396043678Pelotomaculum thermopropionicum SI, complete genomeresponse regulator9e-26117
NC_009848:775000:788461788461789162702Bacillus pumilus SAFR-032, complete genomeresponse regulator7e-26117
NC_016641:2815974:283864628386462839404759Paenibacillus terrae HPL-003 chromosome, complete genometwo-component response regulator2e-23109
NC_014551:442135:461643461643462314672Bacillus amyloliquefaciens DSM 7, complete genomeC4-dicarboxylate response regulator dctR2e-23108
NC_017191:425000:445075445075445746672Bacillus amyloliquefaciens XH7 chromosome, complete genometwo-component response regulator4e-23108
NC_017190:424000:443778443778444449672Bacillus amyloliquefaciens LL3 chromosome, complete genomeC4-dicarboxylate response regulator dctR4e-23108
NC_017188:419000:439045439045439716672Bacillus amyloliquefaciens TA208 chromosome, complete genomeC4-dicarboxylate response regulator dctR4e-23108
NC_016582:1018014:102228410222841022976693Streptomyces bingchenggensis BCW-1 chromosome, complete genomeputative two component system response regulator4e-22105
NC_011830:4951716:495288449528844953579696Desulfitobacterium hafniense DCB-2, complete genomeresponse regulator receiver and unknown domain protein3e-22105
NC_020272:3187482:319200931920093192689681Bacillus amyloliquefaciens IT-45, complete genomeTranscriptional regulatory protein citT2e-22105
NC_012491:1293086:129725612972561298017762Brevibacillus brevis NBRC 100599, complete genometwo-component response regulator6e-22104
NC_014815:4621552:462968346296834630369687Micromonospora sp. L5 chromosome, complete genomehypothetical protein1e-20100
NC_009697:275919:289345289345290019675Clostridium botulinum A str. ATCC 19397 chromosome, completeresponse regulator6e-1890.9
NC_009495:280000:296345296345297019675Clostridium botulinum A str. ATCC 3502 chromosome, complete genomeresponse regulator6e-1890.9
NC_021177:1418213:142138814213881422101714Streptomyces fulvissimus DSM 40593, complete genomeTwo-component system response regulator3e-1685.5
NC_008278:1472709:149396014939601494661702Frankia alni ACN14a, complete genomeC4-dicarboxylate two-component system response regulator7e-1684.3
NC_011283:4767269:477214847721484772852705Klebsiella pneumoniae 342 chromosome, complete genometranscriptional regulatory protein dpiA1e-1583.6
NC_013850:4612812:461769146176914618395705Klebsiella variicola At-22 chromosome, complete genomeresponse regulator receiver and unknown domain protein1e-1583.6
NC_021066:4906239:492568149256814926373693Raoultella ornithinolytica B6, complete genometwo-component system, CitB family, response regulator CitB2e-1479.3
NC_020260:263528:286276286276286974699Cronobacter sakazakii Sp291, complete genometranscriptional regulatory protein CitB3e-1478.6
NC_009921:593665:605917605917606735819Frankia sp. EAN1pec, complete genomeresponse regulator receiver and unknown domain protein3e-1375.9
NC_008025:316302:358420358420359073654Deinococcus geothermalis DSM 11300, complete genomeresponse regulator receiver and unknown domain protein2e-1375.9
NC_015663:1:104971049711189693Enterobacter aerogenes KCTC 2190 chromosome, complete genometwo-component system, CitB family, response regulator CitB3e-1375.5
NC_013757:3100515:310430431043043104990687Geodermatophilus obscurus DSM 43160, complete genomeresponse regulator receiver and unknown domain protein3e-1272
NC_004369:3082691:310357331035733104229657Corynebacterium efficiens YS-314, complete genomeputative transcription regulator9e-1270.5
NC_013929:3206688:320857432085743209257684Streptomyces scabiei 87.22 chromosome, complete genometwo-component response regulator2e-1169.3
NC_014364:3500041:3508154350815435096831530Spirochaeta smaragdinae DSM 11293 chromosome, complete genometwo component transcriptional regulator, AraC family1e-0757
NC_015376:3249773:3263451326345132648241374Burkholderia gladioli BSR3 chromosome chromosome 2, completeSigma-54 dependent DNA-binding response regulator1e-0653.9
NC_009441:3597020:361336136133613614035675Flavobacterium johnsoniae UW101 chromosome, complete genometwo component transcriptional regulator1e-0653.9
NC_013894:1194458:121369612136961214376681Thermocrinis albus DSM 14484 chromosome, complete genometwo component transcriptional regulator, winged helix family2e-0653.1
NC_016613:1877688:1888646188864618896801035Vibrio sp. EJY3 chromosome 1, complete sequencehypothetical protein5e-0651.6
NC_018691:4619245:463387446338744634614741Alcanivorax dieselolei B5 chromosome, complete genomeresponse regulator5e-0651.6
NC_009633:1058000:106259110625911063286696Alkaliphilus metalliredigens QYMF chromosome, complete genometwo component transcriptional regulator7e-0650.8