Pre_GI: BLASTP Hits

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Query: NC_010498:1117938:1128517 Escherichia coli SMS-3-5, complete genome

Start: 1128517, End: 1129878, Length: 1362

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Escherichia coli SMS-3-5 was isolated from a toxic-metal contaminated site, Shipyard Creek, Charleston, South Carolina, USA. This strain is highly resistant to a number of antibiotics. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015424:1689500:1692978169297816943511374Aeromonas veronii B565 chromosome, complete genomeanaerobic C4-dicarboxylate transporter DcuC1e-137490
NC_004547:1600900:1603000160300016043521353Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeanaerobic C4-dicarboxylate transporter3e-57222
NC_012917:1506083:1508182150818215095341353Pectobacterium carotovorum subsp. carotovorum PC1, complete genomeanaerobic c4-dicarboxylate antiporter, DcuC family1e-56221
NC_014618:2139639:2144550214455021459171368Enterobacter cloacae SCF1 chromosome, complete genomeanaerobic c4-dicarboxylate antiporter7e-56218
NC_013421:3279499:3310325331032533116771353Pectobacterium wasabiae WPP163, complete genomeanaerobic c4-dicarboxylate antiporter, DcuC family1e-54214
NC_020064:1547524:1549556154955615509141359Serratia marcescens FGI94, complete genomec4-dicarboxylate anaerobic carrier family protein2e-54213
NC_013508:1289159:1294967129496712963251359Edwardsiella tarda EIB202, complete genomeC4-dicarboxylate transporter9e-54211
NC_015224:1763848:1766026176602617673841359Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,C4-dicarboxylate transporter DcuC1e-53211
NC_020211:1704500:1707137170713717084891353Serratia marcescens WW4, complete genomeanaerobic C4-dicarboxylate transport2e-53210
NC_009832:1719149:1721807172180717231651359Serratia proteamaculans 568, complete genomeanaerobic c4-dicarboxylate antiporter, DcuC family4e-53209
NC_012779:1286500:1291139129113912924971359Edwardsiella ictaluri 93-146, complete genomehypothetical protein4e-53209
NC_012779:1449500:1449734144973414512031470Edwardsiella ictaluri 93-146, complete genomehypothetical protein2e-52207
NC_015566:1659288:1666700166670016680581359Serratia sp. AS12 chromosome, complete genomeanaerobic c4-dicarboxylate antiporter, DcuC family2e-51203
NC_015567:1660462:1666712166671216680701359Serratia sp. AS9 chromosome, complete genomeanaerobic c4-dicarboxylate antiporter, DcuC family2e-51203
NC_013943:2547966:2564260256426025656181359Denitrovibrio acetiphilus DSM 12809 chromosome, complete genomeDcu family anaerobic c4-dicarboxylate antiporter7e-44178
NC_005139:2201820:2267477226747722688471371Vibrio vulnificus YJ016 chromosome I, complete sequenceC4-dicarboxylate transporter5e-43175
NC_013943:2547966:2562651256265125640241374Denitrovibrio acetiphilus DSM 12809 chromosome, complete genomeDcu family anaerobic c4-dicarboxylate antiporter2e-42174
NC_012779:2064582:207731620773162078143828Edwardsiella ictaluri 93-146, complete genomehypothetical protein4e-32139
NC_020207:1346579:1364456136445613658621407Enterococcus faecium NRRL B-2354, complete genomehypothetical protein7e-32138
NC_013199:392450:3933973933973948031407Lactobacillus rhamnosus Lc 705, complete genomecryptic C4-dicarboxylate transporter DcuD3e-29129