Pre_GI: BLASTP Hits

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Query: NC_010498:1117938:1127228 Escherichia coli SMS-3-5, complete genome

Start: 1127228, End: 1127871, Length: 644

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Escherichia coli SMS-3-5 was isolated from a toxic-metal contaminated site, Shipyard Creek, Charleston, South Carolina, USA. This strain is highly resistant to a number of antibiotics. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004431:4319152:432054343205434321082540Escherichia coli CFT073, complete genomePutative maturase-related protein2e-59228
NC_011745:3405520:340552034055203406059540Escherichia coli ED1a chromosome, complete genomeputative maturase-related protein7e-59226
NC_008563:4707826:472773947277394728278540Escherichia coli APEC O1, complete genomehypothetical protein7e-59226
NC_019970:510632:5207095207095221151407Thermoanaerobacterium thermosaccharolyticum M0795, complete genomeRetron-type reverse transcriptase5e-1994.4
NC_019970:2551607:2574597257459725760031407Thermoanaerobacterium thermosaccharolyticum M0795, complete genomeRetron-type reverse transcriptase5e-1994.4
NC_019970:2080419:2095698209569820971041407Thermoanaerobacterium thermosaccharolyticum M0795, complete genomeRetron-type reverse transcriptase5e-1994.4
NC_015555:49842:4843948439498451407Thermoanaerobacterium xylanolyticum LX-11 chromosome, completeRNA-directed DNA polymerase (Reverse transcriptase)4e-1891.7
NC_014538:187747:1949691949691963811413Thermoanaerobacter sp. X513 chromosome, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)8e-1890.5
NC_010320:143109:1551031551031565151413Thermoanaerobacter sp. X514 chromosome, complete genomeRNA-directed DNA polymerase8e-1890.5
NC_007645:4677965:4684237468423746856251389Hahella chejuensis KCTC 2396, complete genomegroup II intron-encoding maturase8e-1890.5
NC_015958:677500:6866716866716880831413Thermoanaerobacter wiegelii Rt8.B1 chromosome, complete genomeRNA-directed DNA polymerase1e-1789.7
NC_013921:80856:1000881000881015001413Thermoanaerobacter italicus Ab9 chromosome, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)1e-1789.7
NC_013921:1396500:1400425140042514018371413Thermoanaerobacter italicus Ab9 chromosome, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)1e-1789.7
NC_013921:1396500:1396798139679813982101413Thermoanaerobacter italicus Ab9 chromosome, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)1e-1789.7
NC_013921:2293411:2294928229492822963401413Thermoanaerobacter italicus Ab9 chromosome, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)1e-1789.7
NC_013921:1977444:1977444197744419788561413Thermoanaerobacter italicus Ab9 chromosome, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)1e-1789.7
NC_019970:439969:4441624441624455681407Thermoanaerobacterium thermosaccharolyticum M0795, complete genomeRetron-type reverse transcriptase2e-1789
NC_002947:737924:7418987418987433191422Pseudomonas putida KT2440, complete genomegroup II intron-encoding maturase4e-1788.2
NC_010321:2276000:2283171228317122845831413Thermoanaerobacter pseudethanolicus ATCC 33223 chromosome, completeRNA-directed DNA polymerase4e-1787.8
NC_010321:35855:4561645616470281413Thermoanaerobacter pseudethanolicus ATCC 33223 chromosome, completeRNA-directed DNA polymerase7e-1787
NC_014964:35862:4562345623470351413Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, completeRNA-directed DNA polymerase7e-1787
NC_014964:923681:9315429315429329541413Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, completeRNA-directed DNA polymerase7e-1787
NC_010337:1:2217622176236031428Heliobacterium modesticaldum Ice1, complete genomereverse transcriptase (RNA-dependent DNA polymerase)7e-1787
NC_010337:1051425:1054702105470210561291428Heliobacterium modesticaldum Ice1, complete genomereverse transcriptase (RNA-dependent DNA polymerase)7e-1787
NC_015425:2528549:2567779256777925692361458Clostridium botulinum BKT015925 chromosome, complete genomeRNA-directed DNA polymerase8e-1787
NC_010337:1051425:1056587105658710580141428Heliobacterium modesticaldum Ice1, complete genomereverse transcriptase (RNA-dependent DNA polymerase)8e-1787
NC_014654:646500:6493246493246507391416Halanaerobium sp. 'sapolanicus' chromosome, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)4e-1684.7
NC_008782:2326439:2354027235402723554481422Acidovorax sp. JS42, complete genomeRNA-directed DNA polymerase2e-1582.8
NC_013223:2609697:2610769261076926121691401Desulfohalobium retbaense DSM 5692, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)2e-1582.4
NC_012560:2026483:203060020306002031277678Azotobacter vinelandii DJ, complete genomegroup II intron-encoding maturase5e-1580.9
NC_021150:2026496:203061320306132031290678Azotobacter vinelandii CA6, complete genomegroup II intron-encoding maturase5e-1580.9
NC_009483:4885914:4912253491225349136561404Geobacter uraniireducens Rf4 chromosome, complete genomeRNA-directed DNA polymerase8e-1580.5
NC_009483:2489000:2512349251234925137521404Geobacter uraniireducens Rf4 chromosome, complete genomeRNA-directed DNA polymerase8e-1580.5
NC_019897:128610:1414831414831428741392Thermobacillus composti KWC4 chromosome, complete genomeRetron-type reverse transcriptase1e-1480.1
NC_002570:126500:1307001307001319561257Bacillus halodurans C-125, complete genometransposase (11)2e-1479.3
NC_016935:1636278:1636278163627816376691392Paenibacillus mucilaginosus 3016 chromosome, complete genomeRNA-directed DNA polymerase2e-1479
NC_019897:128610:1464991464991478901392Thermobacillus composti KWC4 chromosome, complete genomeRetron-type reverse transcriptase3e-1478.6
NC_008346:1431051:1443157144315714446051449Syntrophomonas wolfei subsp. wolfei str. Goettingen, completehypothetical protein5e-1477.8
NC_008346:2251353:2254331225433122557791449Syntrophomonas wolfei subsp. wolfei str. Goettingen, completehypothetical protein5e-1477.8
NC_017986:3407913:341434134143413414694354Pseudomonas putida ND6 chromosome, complete genomegroup II intron-encoding maturase9e-1477
NC_020291:5641444:5645748564574856471061359Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeretron-type reverse transcriptase1e-1376.6
NC_014387:1528000:1528019152801915294131395Butyrivibrio proteoclasticus B316 chromosome 1, complete genomeRNA-dependent DNA polymerase1e-1376.6
NC_004463:9087290:910062291006229101206585Bradyrhizobium japonicum USDA 110, complete genomesimilar to maturase2e-1375.9
NC_018645:2390032:2405637240563724069771341Desulfobacula toluolica Tol2, complete genomeRNA-directed DNA polymerase4e-1374.7
NC_018645:2390032:2395599239559923969391341Desulfobacula toluolica Tol2, complete genomeRNA-directed DNA polymerase4e-1374.7
NC_018645:2390032:2393152239315223944921341Desulfobacula toluolica Tol2, complete genomeRNA-directed DNA polymerase4e-1374.7
NC_018645:3029785:3047408304740830487481341Desulfobacula toluolica Tol2, complete genomeRNA-directed DNA polymerase4e-1374.7
NC_018645:2390032:2399461239946124008011341Desulfobacula toluolica Tol2, complete genomeRNA-directed DNA polymerase4e-1374.7
NC_014366:3653190:367439136743913674882492Gamma proteobacterium HdN1, complete genome5e-1374.7
NC_014366:3653190:3667976366797636692651290Gamma proteobacterium HdN1, complete genomeRNA-directed DNA polymerase (reverse transcriptase)6e-1374.3
NC_014366:3653190:3655631365563136569201290Gamma proteobacterium HdN1, complete genomeRNA-directed DNA polymerase (reverse transcriptase)6e-1374.3
NC_019903:175481:1897791897791911851407Desulfitobacterium dichloroeliminans LMG P-21439 chromosome,Retron-type reverse transcriptase5e-1374.3
NC_016593:416661:4367304367304379891260Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completereverse transcriptase (RNA-dependent DNA polymerase)7e-1373.9
NC_016593:1713000:1726122172612217273811260Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completereverse transcriptase (RNA-dependent DNA polymerase)7e-1373.9
NC_013194:4964000:4991894499189449931561263Candidatus Accumulibacter phosphatis clade IIA str. UW-1, completeRNA-directed DNA polymerase (Reverse transcriptase)7e-1373.9
NC_018645:2390032:2397530239753023988701341Desulfobacula toluolica Tol2, complete genomeRNA-directed DNA polymerase1e-1273.2
NC_015697:1480552:1486760148676014881421383Lactobacillus reuteri SD2112 chromosome, complete genomeRNA-directed DNA polymerase2e-1272.4
NC_015697:742500:7537557537557551371383Lactobacillus reuteri SD2112 chromosome, complete genomeRNA-directed DNA polymerase2e-1272.4
NC_015697:116000:1254021254021267841383Lactobacillus reuteri SD2112 chromosome, complete genomeRNA-directed DNA polymerase2e-1272.4
NC_010003:449192:4602484602484616661419Petrotoga mobilis SJ95, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)2e-1272.4
NC_004193:79588:8221182211834701260Oceanobacillus iheyensis HTE831, complete genomerecombinase for Bh.Int3e-1272
NC_010718:1454087:1459727145972714611541428Natranaerobius thermophilus JW/NM-WN-LF, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)4e-1271.6
NC_004116:1234712:1244650124465012459271278Streptococcus agalactiae 2603V/R, complete genomeGBSi1, group II intron, maturase4e-1271.6
NC_019902:2372097:2380328238032823815751248Thioalkalivibrio nitratireducens DSM 14787, complete genomeRetron-type reverse transcriptase5e-1270.9
NC_013385:1064188:1080741108074110820811341Ammonifex degensii KC4, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)5e-1270.9
NC_006177:2398482:245212724521272452873747Symbiobacterium thermophilum IAM 14863, complete genomehypothetical protein8e-1270.5
NC_010609:1077453:1088145108814510895271383Lactobacillus reuteri JCM 1112, complete genomereverse transcriptase/maturase1e-1169.7
NC_015697:256000:2619622619622632061245Lactobacillus reuteri SD2112 chromosome, complete genomeRNA-directed DNA polymerase2e-1169.3
NC_006177:1254635:1256307125630712575961290Symbiobacterium thermophilum IAM 14863, complete genomegroup II intron-encoding maturase3e-1168.9
NC_006177:12383:3152131521328101290Symbiobacterium thermophilum IAM 14863, complete genomegroup II intron-encoding maturase3e-1168.2
NC_011830:3025437:3041551304155130429601410Desulfitobacterium hafniense DCB-2, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)4e-1168.2
NC_010337:616304:6364406364406375641125Heliobacterium modesticaldum Ice1, complete genomereverse transcriptase family protein4e-1167.8
NC_007907:1940000:1956132195613219574271296Desulfitobacterium hafniense Y51, complete genomehypothetical protein5e-1167.8
NC_014915:3207300:3217397321739732186591263Geobacillus sp. Y412MC52 chromosome, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)6e-1167.4
NC_013411:3201331:3211428321142832126901263Geobacillus sp. Y412MC61, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)6e-1167.4
NC_013851:3321853:3347636334763633489971362Allochromatium vinosum DSM 180 chromosome, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)1e-1066.6
NC_007907:5185510:5193267519326751945861320Desulfitobacterium hafniense Y51, complete genomehypothetical protein2e-1066.2
NC_007712:2028500:203496620349662035814849Sodalis glossinidius str. 'morsitans', complete genomeputative phage reverse transcriptase/maturase protein2e-1065.9
NC_014655:2747399:2753145275314527545941450Leadbetterella byssophila DSM 17132 chromosome, complete genome3e-1065.5
NC_006177:2883476:2925688292568829270081321Symbiobacterium thermophilum IAM 14863, complete genome2e-1065.5
NC_020304:3029243:3041756304175630431051350Desulfocapsa sulfexigens DSM 10523, complete genomeRetron-type reverse transcriptase8e-1063.9
NC_014655:17641:2888228882303301449Leadbetterella byssophila DSM 17132 chromosome, complete genomeRNA-directed DNA polymerase (reverse transcriptase)9e-1063.5
NC_013851:949973:9619009619009632551356Allochromatium vinosum DSM 180 chromosome, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)1e-0963.2
NC_017319:155958:156337156337157140804Shigella flexneri 2002017 plasmid pSFxv_1, complete sequenceputative reverse transcriptase2e-0962.4
NC_014228:1712339:1738743173874317400771335Xenorhabdus nematophila ATCC 19061, complete genomePutative reverse transcriptase2e-0962.4
NC_004851:157675:157675157675158478804Shigella flexneri 2a str. 301 plasmid pCP301, complete sequenceputative reverse transcriptase2e-0962.4
NC_014973:4503054:4518889451888945202291341Geobacter sp. M18 chromosome, complete genomeRNA-directed DNA polymerase2e-0962.4
NC_014973:1257625:1266921126692112682611341Geobacter sp. M18 chromosome, complete genomeRNA-directed DNA polymerase2e-0962.4
NC_014973:2425994:2433276243327624346161341Geobacter sp. M18 chromosome, complete genomeRNA-directed DNA polymerase2e-0962.4
NC_014973:1257625:1272068127206812734081341Geobacter sp. M18 chromosome, complete genomeRNA-directed DNA polymerase2e-0962.4
NC_014973:3414459:3442836344283634441761341Geobacter sp. M18 chromosome, complete genomeRNA-directed DNA polymerase2e-0962.4
NC_014219:975660:9947489947489960751328Bacillus selenitireducens MLS10 chromosome, complete genome2e-0962.4
NC_002939:2697767:2709108270910827104121305Geobacter sulfurreducens PCA, complete genomegroup II intron, maturase4e-0961.2
NC_002939:1021297:1029182102918210304861305Geobacter sulfurreducens PCA, complete genomegroup II intron, maturase4e-0961.2
NC_016023:1143130:1153368115336811547771410Bacillus coagulans 36D1 chromosome, complete genomeRNA-directed DNA polymerase5e-0961.2
NC_005126:1265071:1274750127475012761591410Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein7e-0960.8
NC_011059:670345:6709046709046721391236Prosthecochloris aestuarii DSM 271, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)8e-0960.5
NC_016052:2335648:2342202234220223435001299Tetragenococcus halophilus NBRC 12172, complete genomereverse transcriptase/maturase2e-0858.9
NC_013792:33893:5021050210514541245Bacillus pseudofirmus OF4 plasmid pBpOF4-01, complete sequenceRNA-directed DNA polymerase (Reverse transcriptase)2e-0858.9
NC_015737:1441086:1452717145271714539881272Clostridium sp. SY8519, complete genomehypothetical protein4e-0858.2
NC_014655:2092365:2096909209690920981411233Leadbetterella byssophila DSM 17132 chromosome, complete genomeRNA-directed DNA polymerase4e-0858.2
NC_014655:2092365:2098774209877421000061233Leadbetterella byssophila DSM 17132 chromosome, complete genomeRNA-directed DNA polymerase (reverse transcriptase)4e-0858.2
NC_011983:1746000:1749627174962717508861260Agrobacterium radiobacter K84 chromosome 2, complete genomereverse transcriptase/maturase protein5e-0857.8
NC_010718:1959517:1966127196612719673951269Natranaerobius thermophilus JW/NM-WN-LF, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)5e-0857.8
NC_010718:2513917:2535266253526625365341269Natranaerobius thermophilus JW/NM-WN-LF, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)5e-0857.8
NC_019697:1879769:1893778189377818951931416Chamaesiphon minutus PCC 6605, complete genomeRetron-type reverse transcriptase1e-0757
NC_006177:2883476:2925725292572529269871263Symbiobacterium thermophilum IAM 14863, complete genomegroup II intron-encoding maturase, N-terminally truncated1e-0756.6
NC_009089:581655:5968305968305986591830Clostridium difficile 630, complete genomegroup II intron reverse transcriptase/maturase2e-0755.8
NC_011060:1288862:1305353130535313065941242Pelodictyon phaeoclathratiforme BU-1, complete genomeRNA-directed DNA polymerase2e-0755.8
NC_010468:2406387:2411676241167624129981323Escherichia coli ATCC 8739, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)5e-0754.7
NC_004668:2198027:2249859224985922517451887Enterococcus faecalis V583, complete genomegroup II intron reverse transcriptase maturase6e-0754.3
NC_015914:4248000:4265401426540142666631263Cyclobacterium marinum DSM 745 chromosome, complete genomeRNA-directed DNA polymerase7e-0754.3
NC_014219:2491021:2497495249749524986931199Bacillus selenitireducens MLS10 chromosome, complete genome9e-0753.9
NC_015656:2484749:2495512249551224967891278Frankia symbiont of Datisca glomerata chromosome, complete genomeRNA-directed DNA polymerase8e-0753.9
NC_015656:2900730:2910652291065229119291278Frankia symbiont of Datisca glomerata chromosome, complete genomeRNA-directed DNA polymerase8e-0753.9
NC_015656:132633:1452901452901465671278Frankia symbiont of Datisca glomerata chromosome, complete genomeRNA-directed DNA polymerase8e-0753.9
NC_011898:3303381:3311996331199633151923197Clostridium cellulolyticum H10, complete genome7e-0753.9
NC_017098:1149145:1161306116130611625891284Spirochaeta africana DSM 8902 chromosome, complete genomeRetron-type reverse transcriptase1e-0653.5
NC_021171:4367834:4374012437401243752561245Bacillus sp. 1NLA3E, complete genomeRNA-directed DNA polymerase1e-0653.1
NC_016052:82358:971759717598035861Tetragenococcus halophilus NBRC 12172, complete genomereverse transcriptase/maturase1e-0653.1
NC_003552:3479000:3490274349027434915211248Methanosarcina acetivorans C2A, complete genomereverse transcriptase2e-0652.8
NC_017203:73952:8444484444862491806Bacillus thuringiensis serovar chinensis CT-43 plasmid pCT281,hypothetical protein2e-0652.8
NC_014934:244587:2532992532992546101312Cellulophaga algicola DSM 14237 chromosome, complete genome2e-0652.8
NC_015656:1947810:1961959196195919632241266Frankia symbiont of Datisca glomerata chromosome, complete genomeRNA-directed DNA polymerase2e-0652.8
NC_015914:4248000:4259490425949042607521263Cyclobacterium marinum DSM 745 chromosome, complete genomeRNA-directed DNA polymerase2e-0652.4
NC_021182:4829000:4843338484333848445821245Clostridium pasteurianum BC1, complete genomeRetron-type reverse transcriptase2e-0652.4
NC_017338:793024:8022388022388035241287Staphylococcus aureus subsp. aureus JKD6159 chromosome, completereverse transcriptase, group II intron3e-0652
NC_014219:894829:9021689021689034361269Bacillus selenitireducens MLS10 chromosome, complete genome3e-0652
NC_011059:2272747:2285752228575222869931242Prosthecochloris aestuarii DSM 271, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)3e-0652
NC_014219:2875051:2892888289288828941561269Bacillus selenitireducens MLS10 chromosome, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)3e-0651.6
NC_007607:87000:913429134291545204Shigella dysenteriae Sd197 plasmid pSD1_197, complete sequencehypothetical protein5e-0651.2
NC_015733:864959:8899838899838912151233Pseudomonas putida S16 chromosome, complete genomereverse transcriptase5e-0651.2
NC_014219:2253023:2259161225916122604291269Bacillus selenitireducens MLS10 chromosome, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)5e-0651.2
NC_017986:331610:3373573373573386101254Pseudomonas putida ND6 chromosome, complete genomereverse transcriptase5e-0651.2
NC_015733:3736104:3764353376435337656061254Pseudomonas putida S16 chromosome, complete genomereverse transcriptase5e-0651.2
NC_011898:3303381:3312394331239433142501857Clostridium cellulolyticum H10, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)7e-0650.8
NC_004463:2158116:2213052221305222142961245Bradyrhizobium japonicum USDA 110, complete genomeprobable maturase; reverse transcriptase1e-0550.1