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Query: NC_010475:649177 Synechococcus sp. PCC 7002, complete genome

Start: 649177, End: 672627, Length: 23451

Host Lineage: Synechococcus; Synechococcus; Synechococcaceae; Chroococcales; Cyanobacteria; Bacteria

General Information: The cyanobacterium Synechococcus sp. PCC 7002 (formerly known as Agmenellum quadruplicatum strain PR-6) was originally isolated in 1961 by Chase Van Baalen from an onshore, marine mud flat sample derived from fish pens on Maguyes Island, La Parguera, Puerto Rico. The organism grows in brackish (euryhaline/marine) water and is unicellular but tends to form short filaments of two to four cells during exponential growth at the temperature optimum of 38 degrees C. The strain is extremely tolerant of high light intensities and has been grown at light intensities equivalent to two suns. This unique combination of physiological and genetic properties have long made this strain an important model system to studies of the oxygenic photosynthetic apparatus, the regulation of carbon and nitrogen metabolism, and other aspects of cyanobacterial physiology and metabolism.

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_008319:1272251*1272251129780025550Synechococcus sp. CC9311, complete genome6e-26127BLASTN svgBLASTP svg
NC_019748:42358*423586787025513Stanieria cyanosphaera PCC 7437, complete genome8e-1383.8BLASTN svgBLASTP svg
NC_016024:1185388*1185388120989624509Candidatus Chloracidobacterium thermophilum B chromosome chromosome1e-1179.8BLASTN svgBLASTP svg
NC_008009:4421992*4421992444911527124Acidobacteria bacterium Ellin345, complete genome7e-0763.9BLASTN svgBLASTP svg