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Query: NC_010475:1671823:1684200 Synechococcus sp. PCC 7002, complete genome

Start: 1684200, End: 1684724, Length: 525

Host Lineage: Synechococcus; Synechococcus; Synechococcaceae; Chroococcales; Cyanobacteria; Bacteria

General Information: The cyanobacterium Synechococcus sp. PCC 7002 (formerly known as Agmenellum quadruplicatum strain PR-6) was originally isolated in 1961 by Chase Van Baalen from an onshore, marine mud flat sample derived from fish pens on Maguyes Island, La Parguera, Puerto Rico. The organism grows in brackish (euryhaline/marine) water and is unicellular but tends to form short filaments of two to four cells during exponential growth at the temperature optimum of 38 degrees C. The strain is extremely tolerant of high light intensities and has been grown at light intensities equivalent to two suns. This unique combination of physiological and genetic properties have long made this strain an important model system to studies of the oxygenic photosynthetic apparatus, the regulation of carbon and nitrogen metabolism, and other aspects of cyanobacterial physiology and metabolism.

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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010475:1671823:168089116808911681433543Synechococcus sp. PCC 7002, complete genomehypothetical protein1e-28125
NC_008782:3361850:336604633660463366630585Acidovorax sp. JS42, complete genomeputative type-4 fimbrial pilin related signal peptide protein1e-0858.9
NC_009925:3344894:335025433502543350787534Acaryochloris marina MBIC11017, complete genometype IV pilin protein, putative2e-0858.2
NC_018080:5192264:519949851994985200124627Pseudomonas aeruginosa DK2 chromosome, complete genometype 4 fimbrial biogenesis protein FimU3e-0754.7
NC_008463:5364428:537069253706925371180489Pseudomonas aeruginosa UCBPP-PA14, complete genometype 4 fimbrial biogenesis protein FimU4e-0754.3
NC_008781:3056407:306411630641163064682567Polaromonas naphthalenivorans CJ2, complete genomepilus assembly protein4e-0753.9
NC_008782:3361850:336548133654813366008528Acidovorax sp. JS42, complete genomeN-terminal methylation site1e-0652.8
NC_008340:277223:286695286695287201507Alkalilimnicola ehrlichei MLHE-1, complete genomeputative type-4 fimbrial pilin related signal peptide protein1e-0652.4
NC_010995:3821327:383783638378363838366531Cellvibrio japonicus Ueda107, complete genomepre-pilin like leader sequence3e-0651.6
NC_007604:2555000:256037525603752560941567Synechococcus elongatus PCC 7942, complete genomepilin-like protein1e-0549.7