Pre_GI: BLASTN Hits

Some Help

Query: NC_010473:2548946 Escherichia coli str. K-12 substr. DH10B, complete genome

Start: 2548946, End: 2581737, Length: 32792

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_021150:3505234*3505234352968724454Azotobacter vinelandii CA6, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_012560:3505235*3505235352968824454Azotobacter vinelandii DJ, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_009792:17399701739970176500625037Citrobacter koseri ATCC BAA-895, complete genome2e-38168BLASTN svgBLASTP svg
NC_013716:5141269*5141269517008828820Citrobacter rodentium ICC168, complete genome4e-1591.7BLASTN svgBLASTP svg
NC_013716:28984342898434291709918666Citrobacter rodentium ICC168, complete genome0896BLASTN svgBLASTP svg
NC_013282:1804909*1804909182709922191Cronobacter turicensis, complete genome2e-29139BLASTN svgBLASTP svg
NC_013282:25827202582720260756224843Cronobacter turicensis, complete genome4e-43184BLASTN svgBLASTP svg
NC_012779:26648492664849268361918771Edwardsiella ictaluri 93-146, complete genome8e-23117BLASTN svgBLASTP svg
NC_013508:2587913*2587913262259934687Edwardsiella tarda EIB202, complete genome2e-23119BLASTN svgBLASTP svg
NC_015663:52532425253242527565022409Enterobacter aerogenes KCTC 2190 chromosome, complete genome4e-86327BLASTN svgBLASTP svg
NC_015968:33019583301958333436632409Enterobacter asburiae LF7a chromosome, complete genome8e-26127BLASTN svgBLASTP svg
NC_015968:32772173277217329768120465Enterobacter asburiae LF7a chromosome, complete genome7e-162579BLASTN svgBLASTP svg
NC_015968:28457512845751288222136471Enterobacter asburiae LF7a chromosome, complete genome3e-71278BLASTN svgBLASTP svg
NC_014121:32359113235911326030624396Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete1e-67266BLASTN svgBLASTP svg
NC_009778:95998295998298509925118Enterobacter sakazakii ATCC BAA-894, complete genome3e-34155BLASTN svgBLASTP svg
NC_009778:29512072951207297908827882Enterobacter sakazakii ATCC BAA-894, complete genome2e-23119BLASTN svgBLASTP svg
NC_014306:35249803524980358375158772Erwinia billingiae Eb661, complete genome1e-27133BLASTN svgBLASTP svg
NC_012214:13555001355500137677021271Erwinia pyrifoliae Ep1/96, complete genome8e-29137BLASTN svgBLASTP svg
NC_010694:12508411250841127452923689Erwinia tasmaniensis, complete genome8e-29137BLASTN svgBLASTP svg
NC_008253:24997352499735251999320259Escherichia coli 536, complete genome022240BLASTN svgBLASTP svg
CU928145:27085002708500272609917600Escherichia coli 55989 chromosome, complete genome024890BLASTN svgBLASTP svg
CU928145:1773642*1773642179521821577Escherichia coli 55989 chromosome, complete genome1e-1283.8BLASTN svgBLASTP svg
CU928145:1408280*1408280143235524076Escherichia coli 55989 chromosome, complete genome1e-1283.8BLASTN svgBLASTP svg
CU928145:2655989*2655989268823232244Escherichia coli 55989 chromosome, complete genome06460BLASTN svgBLASTP svg
NC_011748:1408280*1408280143235524076Escherichia coli 55989, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_011748:2655989*2655989268823232244Escherichia coli 55989, complete genome06460BLASTN svgBLASTP svg
NC_011748:27085002708500272609917600Escherichia coli 55989, complete genome024890BLASTN svgBLASTP svg
NC_011748:1773642*1773642179521821577Escherichia coli 55989, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_008563:29099452909945293044120497Escherichia coli APEC O1, complete genome5e-166593BLASTN svgBLASTP svg
NC_008563:26104992610499263209921601Escherichia coli APEC O1, complete genome026250BLASTN svgBLASTP svg
NC_008563:25658762565876258822422349Escherichia coli APEC O1, complete genome06100BLASTN svgBLASTP svg
NC_008563:50119975011997503931827322Escherichia coli APEC O1, complete genome0932BLASTN svgBLASTP svg
NC_008563:2946391*2946391296667220282Escherichia coli APEC O1, complete genome03198BLASTN svgBLASTP svg
NC_010468:2265423*2265423228519619774Escherichia coli ATCC 8739, complete genome6e-1177.8BLASTN svgBLASTP svg
NC_010468:14127911412791143188119091Escherichia coli ATCC 8739, complete genome024920BLASTN svgBLASTP svg
NC_004431:14016811401681142114919469Escherichia coli CFT073, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_004431:27472372747237277257425338Escherichia coli CFT073, complete genome023000BLASTN svgBLASTP svg
NC_004431:30409533040953306393422982Escherichia coli CFT073, complete genome03190BLASTN svgBLASTP svg
NC_009801:26397872639787266007120285Escherichia coli E24377A, complete genome024790BLASTN svgBLASTP svg
NC_009801:17566101756610177871522106Escherichia coli E24377A, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_009800:2505872*2505872252809922228Escherichia coli HS, complete genome029830BLASTN svgBLASTP svg
NC_009800:32011532011533924219128Escherichia coli HS, complete genome9e-38167BLASTN svgBLASTP svg
CU928160:2715246*2715246274020524960Escherichia coli IAI1 chromosome, complete genome2e-1179.8BLASTN svgBLASTP svg
CU928160:16688421668842169164522804Escherichia coli IAI1 chromosome, complete genome6e-1177.8BLASTN svgBLASTP svg
CU928160:25130002513000253520022201Escherichia coli IAI1 chromosome, complete genome024960BLASTN svgBLASTP svg
NC_011750:2585015*2585015261198826974Escherichia coli IAI39 chromosome, complete genome023430BLASTN svgBLASTP svg
NC_011750:2928990*2928990296940040411Escherichia coli IAI39 chromosome, complete genome8e-100373BLASTN svgBLASTP svg
NC_011750:5045927*5045927506827722351Escherichia coli IAI39 chromosome, complete genome03261BLASTN svgBLASTP svg
NC_011750:43900004390000444275952760Escherichia coli IAI39 chromosome, complete genome06577BLASTN svgBLASTP svg
NC_000913:2455037*2455037248136126325Escherichia coli K12, complete genome025650BLASTN svgBLASTP svg
NC_000913:1188999*1188999122144532447Escherichia coli K12, complete genome3e-142513BLASTN svgBLASTP svg
CP002516:1475521*1475521149709321573Escherichia coli KO11, complete genome06470BLASTN svgBLASTP svg
CP002516:14194131419413144219622784Escherichia coli KO11, complete genome024590BLASTN svgBLASTP svg
CP002516:2305659*2305659232825322595Escherichia coli KO11, complete genome6e-1177.8BLASTN svgBLASTP svg
CP002797:24729082472908249359920692Escherichia coli NA114, complete genome010530BLASTN svgBLASTP svg
AP010958:2911741*2911741294759935859Escherichia coli O103:H2 str. 12009 DNA, complete genome024680BLASTN svgBLASTP svg
NC_002655:13329611332961135150618546Escherichia coli O157:H7 EDL933, complete genome3e-1695.6BLASTN svgBLASTP svg
NC_002655:30194030194032759925660Escherichia coli O157:H7 EDL933, complete genome5e-166593BLASTN svgBLASTP svg
NC_002655:3260500*3260500328246521966Escherichia coli O157:H7 EDL933, complete genome09993BLASTN svgBLASTP svg
NC_002655:91965491965493956619913Escherichia coli O157:H7 EDL933, complete genome1e-33153BLASTN svgBLASTP svg
NC_002695:3189425*3189425321610426680Escherichia coli O157:H7 str. Sakai, complete genome016180BLASTN svgBLASTP svg
NC_002695:30193930193932873026792Escherichia coli O157:H7 str. Sakai, complete genome5e-166593BLASTN svgBLASTP svg
NC_002695:91750991750994039822890Escherichia coli O157:H7 str. Sakai, complete genome1e-33153BLASTN svgBLASTP svg
NC_010498:25557062555706258100625301Escherichia coli SMS-3-5, complete genome023470BLASTN svgBLASTP svg
NC_011751:27688642768864278709918236Escherichia coli UMN026 chromosome, complete genome022830BLASTN svgBLASTP svg
NC_011751:643976*64397666569121716Escherichia coli UMN026 chromosome, complete genome3e-1385.7BLASTN svgBLASTP svg
NC_011751:18596061859606188482925224Escherichia coli UMN026 chromosome, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_007946:26254612625461264923523775Escherichia coli UTI89, complete genome019700BLASTN svgBLASTP svg
NC_007946:28947932894793291753922747Escherichia coli UTI89, complete genome5e-166593BLASTN svgBLASTP svg
NC_007946:2593500*2593500261819924700Escherichia coli UTI89, complete genome06108BLASTN svgBLASTP svg
NC_007946:29313642931364295051219149Escherichia coli UTI89, complete genome03198BLASTN svgBLASTP svg
CP002185:2608000*2608000263106823069Escherichia coli W, complete genome06470BLASTN svgBLASTP svg
CP002185:26596282659628268309923472Escherichia coli W, complete genome025040BLASTN svgBLASTP svg
CP002185:17708151770815179359922785Escherichia coli W, complete genome6e-1177.8BLASTN svgBLASTP svg
AC_000091:24624612462461248878526325Escherichia coli W3110 DNA, complete genome025650BLASTN svgBLASTP svg
AC_000091:1191353*1191353122209930747Escherichia coli W3110 DNA, complete genome3e-142513BLASTN svgBLASTP svg
NC_011740:45203734520373454479624424Escherichia fergusonii ATCC 35469, complete genome02145BLASTN svgBLASTP svg
NC_011740:62140862140864031618909Escherichia fergusonii ATCC 35469, complete genome01199BLASTN svgBLASTP svg
NC_011740:20721732072173211413741965Escherichia fergusonii ATCC 35469, complete genome2e-29139BLASTN svgBLASTP svg
NC_013956:12075001207500123738329884Pantoea ananatis LMG 20103 chromosome, complete genome4e-1591.7BLASTN svgBLASTP svg
NC_014838:21800021800024009922100Pantoea sp. At-9b plasmid pPAT9B01, complete sequence1e-0663.9BLASTN svgBLASTP svg
NC_014562:983398*983398101509931702Pantoea vagans C9-1 chromosome, complete genome5e-27131BLASTN svgBLASTP svg
NC_012917:31980003198000322168023681Pectobacterium carotovorum subsp. carotovorum PC1, complete genome5e-24121BLASTN svgBLASTP svg
NC_013421:15453861545386156866923284Pectobacterium wasabiae WPP163, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_015061:12519051251905128092529021Rahnella sp. Y9602 chromosome, complete genome4e-18101BLASTN svgBLASTP svg
NC_015062:999699996912011920151Rahnella sp. Y9602 plasmid pRAHAQ01, complete sequence1e-1593.7BLASTN svgBLASTP svg
NC_011149:58889558889560977120877Salmonella enterica subsp. enterica serovar Agona str. SL483,2e-81311BLASTN svgBLASTP svg
NC_006905:65173265173267724625515Salmonella enterica subsp. enterica serovar Choleraesuis str2e-63252BLASTN svgBLASTP svg
NC_006905:39427533942753396819425442Salmonella enterica subsp. enterica serovar Choleraesuis str0773BLASTN svgBLASTP svg
NC_006905:40115440115443134930196Salmonella enterica subsp. enterica serovar Choleraesuis str5e-107396BLASTN svgBLASTP svg
NC_011083:654479*65447967531220834Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,8e-60240BLASTN svgBLASTP svg
NC_011083:25428762542876256885525980Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,0977BLASTN svgBLASTP svg
NC_011083:40302240302245026847247Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,5e-33151BLASTN svgBLASTP svg
NC_011080:61042861042863159921172Salmonella enterica subsp. enterica serovar Newport str. SL254,6e-76293BLASTN svgBLASTP svg
NC_006511:24677632467763249158023818Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC5e-61244BLASTN svgBLASTP svg
NC_006511:2251022*2251022227421723196Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC1e-76295BLASTN svgBLASTP svg
NC_006511:529424*52942455225122828Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC0969BLASTN svgBLASTP svg
NC_010102:24954412495441251396918529Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,2e-69272BLASTN svgBLASTP svg
NC_003198:38241873824187384903924853Salmonella enterica subsp. enterica serovar Typhi str. CT18,0801BLASTN svgBLASTP svg
NC_003198:2453074*2453074247785124778Salmonella enterica subsp. enterica serovar Typhi str. CT18,0985BLASTN svgBLASTP svg
NC_003198:598000*59800061851020511Salmonella enterica subsp. enterica serovar Typhi str. CT18,1e-76295BLASTN svgBLASTP svg
NC_004631:38096783809678383452924852Salmonella enterica subsp. enterica serovar Typhi Ty2, complete0801BLASTN svgBLASTP svg
NC_004631:53125453125455515123898Salmonella enterica subsp. enterica serovar Typhi Ty2, complete0985BLASTN svgBLASTP svg
NC_004631:23663352366335238728320949Salmonella enterica subsp. enterica serovar Typhi Ty2, complete1e-76295BLASTN svgBLASTP svg
NC_003197:60604860604862559319546Salmonella typhimurium LT2, complete genome8e-60240BLASTN svgBLASTP svg
NC_008700:26075262607526263153824013Shewanella amazonensis SB2B, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_009901:42162064216206423672120516Shewanella pealeana ATCC 700345, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_008577:1690946*1690946171443823493Shewanella sp. ANA-3 chromosome 1, complete sequence6e-0867.9BLASTN svgBLASTP svg
NC_008321:1636148*1636148165976723620Shewanella sp. MR-4, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_008322:1708631*1708631173114222512Shewanella sp. MR-7, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_010658:2529033*2529033255581226780Shigella boydii CDC 3083-94, complete genome023930BLASTN svgBLASTP svg
NC_007613:2376974*2376974240022423251Shigella boydii Sb227, complete genome023900BLASTN svgBLASTP svg
NC_007606:23530982353098237552222425Shigella dysenteriae Sd197, complete genome09398BLASTN svgBLASTP svg
NC_007606:4182188*4182188420162219435Shigella dysenteriae Sd197, complete genome07765BLASTN svgBLASTP svg
NC_004741:24562972456297247959923303Shigella flexneri 2a str. 2457T, complete genome024310BLASTN svgBLASTP svg
NC_004741:310382*31038233778027399Shigella flexneri 2a str. 2457T, complete genome0922BLASTN svgBLASTP svg
NC_004337:309833*30983333864628814Shigella flexneri 2a str. 301, complete genome01029BLASTN svgBLASTP svg
NC_004337:24784612478461250482826368Shigella flexneri 2a str. 301, complete genome024310BLASTN svgBLASTP svg
NC_008258:24730002473000249769824699Shigella flexneri 5 str. 8401, complete genome024280BLASTN svgBLASTP svg
NC_008258:26980626980629518525380Shigella flexneri 5 str. 8401, complete genome0930BLASTN svgBLASTP svg
NC_007384:25878762587876261159923724Shigella sonnei Ss046, complete genome024170BLASTN svgBLASTP svg
NC_009785:1414892*1414892143928524394Streptococcus gordonii str. Challis substr. CH1, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_021175:353292*35329237126317972Streptococcus oligofermentans AS 1.3089, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_012925:1357783*1357783138009922317Streptococcus suis P1/7, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_002506:82240182240184494222542Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, complete4e-0661.9BLASTN svgBLASTP svg
NC_015224:32917363291736331359921864Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,2e-1489.7BLASTN svgBLASTP svg
NC_010159:409500*40950045168242183Yersinia pestis Angola, complete genome3e-1075.8BLASTN svgBLASTP svg