Pre_GI: BLASTP Hits

Some Help

Query: NC_010408:79855:6590 Clavibacter michiganensis subsp. sepedonicus plasmid pCSL1,

Start: 6590, End: 7543, Length: 954

Host Lineage: Clavibacter michiganensis; Clavibacter; Microbacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Causative agent of bacterial ring rot. Isolated from infected potato. This organism was first described and classified in 1914 as "Bacterium sepedonicus" and is considered a major plant pathogen. It is a phytopathogenic actinomycete that causes wilt and tuber rot in potato, which is a plant vascular disease with very high bacterial titers. Pathogenicity is believed to be associated with the presence of two plasmids, pCSL1 and pCSL2. This species is subdivided into five subspecies: michiganensis, sepedonicus, nebraskensis, tesselarius and insidiosus each of which infects specific hosts: tomato, potato, corn, wheat and alfalfa, respectively. Members of the Clavibacter genus are known to produce antimicrobial compounds.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_021177:6127431:6129765612976561308141050Streptomyces fulvissimus DSM 40593, complete genomeDNA processing Smf-family protein2e-41169
NC_010572:2216309:2217400221740022187161317Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative DNA processing Smf-family protein3e-39162
NC_014643:1986440:2000796200079620022801485Rothia dentocariosa ATCC 17931 chromosome, complete genomeDNA protecting protein DprA7e-39161
NC_010730:578493:5826215826215836911071Sulfurihydrogenibium sp. YO3AOP1, complete genomeDNA protecting protein DprA3e-37155
NC_008699:2418722:2419839241983924208881050Nocardioides sp. JS614, complete genomeDNA protecting protein DprA5e-37155
NC_015565:1647554:1647554164755416486451092Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completeDNA protecting protein DprA4e-36152
NC_016781:1408235:1436415143641514375901176Corynebacterium pseudotuberculosis 3/99-5 chromosome, completeRossmann-fold nucleotide-binding protein/SMF1e-33144
NC_014329:1407880:1436477143647714376521176Corynebacterium pseudotuberculosis FRC41 chromosome, completehypothetical protein1e-33144
NC_017300:1426975:1433834143383414350091176Corynebacterium pseudotuberculosis 1002 chromosome, completeRossmann-fold nucleotide-binding protein/SMF1e-33144
NC_017301:1425293:1436222143622214373971176Corynebacterium pseudotuberculosis C231 chromosome, completeRossmann-fold nucleotide-binding protein/SMF1e-33144
NC_017303:1420758:1436300143630014374751176Corynebacterium pseudotuberculosis I19 chromosome, complete genomeRossmann-fold nucleotide-binding protein/SMF1e-33144
NC_017031:1420738:1436279143627914374541176Corynebacterium pseudotuberculosis P54B96 chromosome, completeRossmann-fold nucleotide-binding protein/SMF8e-34144
NC_012440:197728:2123492123492134071059Persephonella marina EX-H1, complete genomeprotein smf (DNA-processing chain A)9e-33140
NC_015573:997629:1014479101447910155881110Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomeDNA protecting protein DprA2e-32139
NC_020291:1437431:1453854145385414549121059Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeDNA protecting protein DprA3e-32139
NC_015312:1265797:129858112985811299459879Pseudonocardia dioxanivorans CB1190 chromosome, complete genomeDNA protecting protein DprA9e-32137
NC_002935:1534889:1534889153488915360401152Corynebacterium diphtheriae NCTC 13129, complete genomehypothetical protein2e-31136
NC_016790:1480441:1490742149074214918931152Corynebacterium diphtheriae VA01 chromosome, complete genomehypothetical protein5e-31135
NC_016786:1519481:1523480152348015246311152Corynebacterium diphtheriae HC01 chromosome, complete genomehypothetical protein5e-31135
NC_016782:1520324:1523215152321515243661152Corynebacterium diphtheriae 241 chromosome, complete genomehypothetical protein5e-31135
NC_016788:1509943:1518248151824815193991152Corynebacterium diphtheriae HC04 chromosome, complete genomehypothetical protein5e-31135
NC_016787:1509831:1514783151478315159341152Corynebacterium diphtheriae HC03 chromosome, complete genomehypothetical protein5e-31135
NC_014314:576465:6619486619486630361089Dehalogenimonas lykanthroporepellens BL-DC-9 chromosome, completeDNA protecting protein DprA2e-30133
NC_014328:1379437:1396457139645713975571101Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative Smf protein2e-30133
NC_003888:6103534:6106490610649061076381149Streptomyces coelicolor A3(2), complete genomehypothetical protein3e-30132
NC_012438:159927:1645131645131655831071Sulfurihydrogenibium azorense Az-Fu1 chromosome, complete genomeDNA protecting protein DprA3e-30132
NC_008577:44184:4418444184452001017Shewanella sp. ANA-3 chromosome 1, complete sequenceDNA protecting protein DprA3e-30132
NC_013216:1219775:1239497123949712405971101Desulfotomaculum acetoxidans DSM 771, complete genomeDNA protecting protein DprA4e-30132
NC_009848:1542978:156300915630091563911903Bacillus pumilus SAFR-032, complete genomeSmf family DNA processing protein6e-30131
NC_009749:289695:309012309012309818807Francisella tularensis subsp. holarctica FTA, complete genomeDNA protecting protein DprA4e-29129
NC_014960:1735786:1790547179054717916591113Anaerolinea thermophila UNI-1, complete genomeputative DNA processing protein3e-29129
NC_013162:811763:8154028154028164961095Capnocytophaga ochracea DSM 7271, complete genomeDNA protecting protein DprA3e-29129
NC_007880:290059:309372309372310109738Francisella tularensis subsp. holarctica, complete genome4e-29128
NC_014377:1060000:1062283106228310633621080Thermosediminibacter oceani DSM 16646 chromosome, complete genomeDNA protecting protein DprA7e-28124
NC_017294:758992:7621257621257632191095Candidatus Arthromitus sp. SFB-mouse-Yit, complete genomeDNA protecting protein DprA2e-27123
NC_009053:1942973:1942973194297319441271155Actinobacillus pleuropneumoniae L20, complete genomeProtein smf (DNA-processing chain A)4e-26118
NC_008312:4555499:4555499455549945566411143Trichodesmium erythraeum IMS101, complete genomeDNA protecting protein DprA5e-26118
NC_017501:121902:1232701232701244571188Neisseria meningitidis 8013, complete genomeSmf protein (DNA processing chain A)1e-25117
NC_017516:123618:1249861249861261791194Neisseria meningitidis H44/76 chromosome, complete genomeputative DNA processing protein DprA8e-26117
NC_014721:434501:4426364426364437331098Caldicellulosiruptor kristjanssonii 177R1B chromosome, completeDNA protecting protein dpra2e-25116
NC_010120:2055803:2075239207523920764261188Neisseria meningitidis 053442, complete genomeDNA processing chain A2e-25116
NC_011658:3603009:363857136385713639440870Bacillus cereus AH187 chromosome, complete genomeDNA processing Smf protein6e-25115
NC_014335:3589726:360138036013803602129750Bacillus cereus biovar anthracis str. CI chromosome, completenucleotide-binding protein, Smf family6e-25115
NC_017513:115870:1172381172381184251188Neisseria meningitidis G2136 chromosome, complete genomeputative DNA processing protein DprA5e-25115
NC_005957:3665657:367219936721993673068870Bacillus thuringiensis serovar konkukian str. 97-27, completenucleotide-binding protein, SMF family4e-25115
NC_017512:2116295:2135729213572921369161188Neisseria meningitidis WUE 2594, complete genomeSmf protein (DNA processing chain A)4e-25115
NC_006511:3364448:3382067338206733831911125Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein4e-25115
NC_013016:2041890:2061326206132620625131188Neisseria meningitidis alpha14 chromosome, complete genomeDNA processing protein DprA3e-25115
NC_014844:2056943:2061979206197920632981320Desulfovibrio aespoeensis Aspo-2 chromosome, complete genomeDNA protecting protein DprA3e-25115
NC_009495:2571732:2571732257173225728171086Clostridium botulinum A str. ATCC 3502 chromosome, complete genomeDNA protecting protein DprA6e-25114
NC_011969:3575988:358253135825313583400870Bacillus cereus Q1 chromosome, complete genomeDNA processing protein (smf family)1e-24114
NC_002695:4153394:4167448416744841685721125Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein2e-24113
NC_003909:3606177:362592436259243626793870Bacillus cereus ATCC 10987, complete genomeDNA processing protein (smf family)3e-24112
NC_014171:3726054:373450037345003735369870Bacillus thuringiensis BMB171 chromosome, complete genomenucleotide-binding SMF protein7e-24111
NC_017208:3816753:385063538506353851504870Bacillus thuringiensis serovar chinensis CT-43 chromosome, completenucleotide-binding SMF protein8e-24111
CP002185:3627992:3645405364540536465291125Escherichia coli W, complete genomeDNA protecting protein DprA1e-23110
NC_010003:1360472:140726114072611408253993Petrotoga mobilis SJ95, complete genomeDNA protecting protein DprA1e-23110
NC_014483:1973233:1995184199518419963711188Paenibacillus polymyxa E681 chromosome, complete genomeSmf protein3e-23109
NC_016826:929259:931492931492932334843Streptococcus infantarius subsp. infantarius CJ18 chromosome,DprA/SMF protein, putative DNA processingfactor3e-23109
NC_014624:2297000:2320474232047423215801107Eubacterium limosum KIST612 chromosome, complete genomeDNA protecting protein DprA3e-23109
NC_008752:5213431:5229981522998152312071227Acidovorax avenae subsp. citrulli AAC00-1, complete genomeDNA protecting protein DprA4e-23108
NC_018607:1865972:1865972186597218672101239Brachyspira pilosicoli B2904 chromosome, complete genomeDNA protecting protein DprA4e-23108
NC_019908:1043401:1045622104562210467641143Brachyspira pilosicoli P43/6/78 chromosome, complete genomeDNA protecting protein DprA5e-23108
NC_015422:4822636:4840955484095548420941140Alicycliphilus denitrificans K601 chromosome, complete genomeDNA protecting protein DprA2e-22107
NC_015138:5276857:5295164529516452963751212Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completeDNA protecting protein DprA1e-22107
NC_006526:1202000:1218755121875512199121158Zymomonas mobilis subsp. mobilis ZM4, complete genomeDNA processing chain A8e-23107
NC_011992:3615517:3632024363202436331841161Acidovorax ebreus TPSY, complete genomeDNA protecting protein DprA2e-22106
NC_018145:147759:1477591477591489161158Zymomonas mobilis subsp. mobilis ATCC 29191 chromosome, completeDNA protecting protein DprA2e-22106
NC_013282:3962188:3977295397729539784401146Cronobacter turicensis, complete genomeProtein smf3e-22105
NC_010410:3719599:3740583374058337417131131Acinetobacter baumannii AYE, complete genomeputative Rossmann-fold nucleotide-binding protein involved in DNA uptake (Smf)4e-22105
NC_010611:208268:2082682082682093981131Acinetobacter baumannii ACICU, complete genomepredicted Rossmann fold nucleotide-binding protein5e-22105
NC_014815:1686409:168954816895481690285738Micromonospora sp. L5 chromosome, complete genome1e-21104
NC_012471:1197534:119976711997671200612846Streptococcus equi subsp. equi 4047, complete genomeSMF family protein9e-22104
NC_013199:1407742:142346114234611424276816Lactobacillus rhamnosus Lc 705, complete genomeDNA processing Smf protein / Rossmann fold nucleotide-binding protein for DNA uptake8e-22104
NC_008260:125500:1441411441411452021062Alcanivorax borkumensis SK2, complete genomepeptide deformylase, DNA processing protein2e-21103
NC_007513:1764739:1788619178861917896861068Synechococcus sp. CC9902, complete genomeSMF protein2e-21103
NC_007798:301456:3177673177673189031137Neorickettsia sennetsu str. Miyayama, complete genomeputative DNA processing protein DprA1e-20100
NC_013939:1812259:1823583182358318247191137Deferribacter desulfuricans SSM1, complete genomeDNA processing protein A2e-20100
NC_016810:2871689:287724528772452878222978Salmonella enterica subsp. enterica serovar Typhimurium strputative competence protein5e-2098.6
NC_016857:2871689:287724528772452878222978Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative competence protein5e-2098.6
NC_017046:2869873:287598728759872876964978Salmonella enterica subsp. enterica serovar Typhimurium str. 798competence protein5e-2098.6
NC_012658:2498087:2498087249808724992441158Clostridium botulinum Ba4 str. 657 chromosome, complete genomeDNA uptake protein6e-2098.2
NC_007645:6500059:653267165326716533372702Hahella chejuensis KCTC 2396, complete genomepredicted Rossmann fold nucleotide-binding protein involved in DNA uptake1e-1893.6
NC_007168:1705763:171998417199841720850867Staphylococcus haemolyticus JCSC1435, complete genomehypothetical protein6e-1891.7
NC_008268:7052202:705544470554447055860417Rhodococcus sp. RHA1, complete genomeSmf protein1e-1790.5
NC_004461:921364:925144925144926016873Staphylococcus epidermidis ATCC 12228, complete genomeDNA processing Smf protein2e-1790.5
NC_016010:1822212:185250718525071853496990Xanthomonas axonopodis pv. citrumelo F1 chromosome, completeRossmann fold nucleotide-binding protein5e-1789
NC_007940:782207:793644793644794321678Rickettsia bellii RML369-C, complete genomePutative DNA processing protein DprA9e-1684.7
NC_009883:871594:882031882031882702672Rickettsia bellii OSU 85-389, complete genomePutative DNA processing protein DprA1e-1584.3
NC_011601:846358:864090864090865049960Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomehypothetical protein1e-1584
NC_017238:272980:304783304783305727945Borrelia afzelii PKo chromosome, complete genomeDNA protecting protein DprA5e-1582
NC_005835:1773482:1775457177545717764611005Thermus thermophilus HB27, complete genomecompetence protein dprA1e-1480.9
NC_010673:291679:308358308358309302945Borrelia hermsii DAH, complete genomeSmf protein1e-1377.4
NC_014833:3444550:3455787345578734569291143Ruminococcus albus 7 chromosome, complete genomeSMF family protein4e-1375.9
NC_008710:277207:307652307652308596945Borrelia turicatae 91E135, complete genomeSmf protein5e-1375.1
NC_011138:318168:325983325983326870888Alteromonas macleodii 'Deep ecotype', complete genomeSMF protein1e-1273.9
NC_010572:4181403:4190954419095441919821029Streptomyces griseus subsp. griseus NBRC 13350, complete genomehypothetical protein2e-1273.6
NC_016818:1605918:161583616158361616822987Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completeputative Rossmann fold nucleotide-binding protein involved in DNA uptake4e-1272.4
NC_014169:515957:523221523221524009789Bifidobacterium longum subsp. longum JDM301 chromosome, completeSMF family protein5e-1272
NC_016048:2873669:290451629045162905475960Oscillibacter valericigenes Sjm18-20, complete genomeputative smf protein7e-1271.6
NC_012997:4545875:458510345851034585996894Teredinibacter turnerae T7901, complete genomeSMF protein7e-1271.6
NC_009051:1455183:148880314888031489747945Methanoculleus marisnigri JR1, complete genomeSMF family protein1e-1170.9
NC_009778:2951207:296554729655472966524978Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein2e-1067
NC_015658:319296:327387327387328331945Halopiger xanaduensis SH-6 plasmid pHALXA01, complete sequenceSMF family protein2e-1066.6
NC_006085:925604:927480927480927977498Propionibacterium acnes KPA171202, complete genomeconserved protein, putative DNA processing Smf-family protein3e-1066.2
NC_014656:1161188:1172044117204411730601017Bifidobacterium longum subsp. longum BBMN68 chromosome, completesmf family protein6e-1065.1
NC_014910:1734634:174680617468061747702897Alicycliphilus denitrificans BC chromosome, complete genomesmf family protein2e-0963.5
NC_007333:810381:834415834415835383969Thermobifida fusca YX, complete genomesimilar to Rossmann fold nucleotide-binding protein involved in DNA uptake4e-0962.4
NC_005945:3636321:365142436514243652089666Bacillus anthracis str. Sterne, complete genomenucleotide-binding SMF protein6e-0858.5
NC_012581:559182:587166587166587831666Bacillus anthracis str. CDC 684 chromosome, complete genomeDNA processing Smf protein6e-0858.5
NC_012659:3617000:365075636507563651421666Bacillus anthracis str. A0248, complete genome6e-0858.5
NC_008687:302450:312313312313313308996Paracoccus denitrificans PD1222 chromosome 2, complete sequenceSMF family protein1e-0757.8
NC_008268:7052202:706616170661617066598438Rhodococcus sp. RHA1, complete genomehypothetical protein2e-0756.6
NC_012796:2757500:2765810276581027668201011Desulfovibrio magneticus RS-1, complete genomeSMF protein4e-0755.8
NC_013960:2366910:237763323776332378607975Nitrosococcus halophilus Nc4 chromosome, complete genomeSMF family protein4e-0755.8
NC_015164:2473496:248019924801992481125927Bacteroides salanitronis DSM 18170 chromosome, complete genomeSMF family protein3e-0652.8