Pre_GI: BLASTP Hits

Some Help

Query: NC_010407:410918:424639 Clavibacter michiganensis subsp. sepedonicus chromosome, complete

Start: 424639, End: 425760, Length: 1122

Host Lineage: Clavibacter michiganensis; Clavibacter; Microbacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Causative agent of bacterial ring rot. Isolated from infected potato. This organism was first described and classified in 1914 as "Bacterium sepedonicus" and is considered a major plant pathogen. It is a phytopathogenic actinomycete that causes wilt and tuber rot in potato, which is a plant vascular disease with very high bacterial titers. Pathogenicity is believed to be associated with the presence of two plasmids, pCSL1 and pCSL2. This species is subdivided into five subspecies: michiganensis, sepedonicus, nebraskensis, tesselarius and insidiosus each of which infects specific hosts: tomato, potato, corn, wheat and alfalfa, respectively. Members of the Clavibacter genus are known to produce antimicrobial compounds.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013521:1619394:1619394161939416205661173Sanguibacter keddieii DSM 10542, complete genomeZn-dependent oxidoreductase, NADPH:quinone reductase7e-67254
NC_007511:1681764:168079416807941681786993Burkholderia sp. 383 chromosome 2, complete sequenceZinc-containing alcohol dehydrogenase superfamily2e-1273.9
NC_009512:3068495:3080911308091130819241014Pseudomonas putida F1, complete genomeAlcohol dehydrogenase, zinc-binding domain protein1e-1170.9
NC_013595:606096:616999616999617985987Streptosporangium roseum DSM 43021, complete genomealcohol dehydrogenase1e-1170.9
NC_007776:2731981:2743993274399327449941002Synechococcus sp. JA-2-3B'a(2-13), complete genomeoxidoreductase, zinc-binding dehydrogenase family4e-1169.7
NC_013929:4807910:4814693481469348156971005Streptomyces scabiei 87.22 chromosome, complete genomezinc-binding dehydrogenase7e-1168.6
NC_013174:309943:309943309943310884942Jonesia denitrificans DSM 20603, complete genomeAlcohol dehydrogenase GroES domain protein2e-1067
NC_012581:1075663:1076717107671710777241008Bacillus anthracis str. CDC 684 chromosome, complete genomeoxidoreductase, zinc-binding dehydrogenase family3e-1066.6
NC_011145:3750021:378486837848683785794927Anaeromyxobacter sp. K, complete genomeAlcohol dehydrogenase zinc-binding domain protein1e-0964.7
NC_007645:3630884:364451636445163645424909Hahella chejuensis KCTC 2396, complete genomeNADPH:quinone reductase and related Zn-dependent oxidoreductase4e-0962.8
NC_009485:1222697:1224649122464912256801032Bradyrhizobium sp. BTAi1 chromosome, complete genomeNADPH quinone oxidoreductase9e-0961.6
NC_015635:4097711:4099733409973341007671035Microlunatus phosphovorus NM-1, complete genomeputative oxidoreductase1e-0861.2
NC_013132:4355363:439016543901654391136972Chitinophaga pinensis DSM 2588, complete genomeAlcohol dehydrogenase GroES domain protein3e-0860.1
NC_008148:258292:2611952611952622051011Rubrobacter xylanophilus DSM 9941, complete genomeAlcohol dehydrogenase, zinc-binding protein7e-0858.5
NC_008312:2798463:279846327984632799458996Trichodesmium erythraeum IMS101, complete genomeAlcohol dehydrogenase, zinc-binding9e-0858.2
NC_009380:725870:745827745827746810984Salinispora tropica CNB-440 chromosome, complete genomealcohol dehydrogenase1e-0758.2
NC_007484:2893878:290125629012562902254999Nitrosococcus oceani ATCC 19707, complete genomeZinc-containing alcohol dehydrogenase superfamily1e-0757.8
NC_015186:573289:5924025924025934091008Acidiphilium multivorum AIU301, complete genomeputative oxidoreductase2e-0757.4
NC_011894:6516856:6537243653724365382441002Methylobacterium nodulans ORS 2060, complete genomeAlcohol dehydrogenase zinc-binding domain protein2e-0757.4
NC_015957:4525580:45344414534441454630811868Streptomyces violaceusniger Tu 4113 chromosome, complete genomeacyl transferase3e-0756.6
NC_015379:3175500:317867831786783179652975Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative zinc-binding oxidoreductase5e-0755.8
NC_013947:4413382:4425532442553244268631332Stackebrandtia nassauensis DSM 44728 chromosome, complete genomecrotonyl-CoA reductase5e-0755.8
NC_010725:750911:7704117704117714271017Methylobacterium populi BJ001, complete genomezinc-binding alcohol dehydrogenase family protein8e-0755.1
NC_018664:1573925:159112215911221592066945Clostridium acidurici 9a chromosome, complete genomezinc-containing alcohol dehydrogenase9e-0755.1
NC_017955:2494640:251023225102322511218987Modestobacter marinus, complete genomealcohol dehydrogenase1e-0654.7
NC_017986:5467279:5470065547006554710661002Pseudomonas putida ND6 chromosome, complete genomealcohol dehydrogenase1e-0654.7
NC_009512:3068495:3085865308586530868661002Pseudomonas putida F1, complete genomeAlcohol dehydrogenase, zinc-binding domain protein1e-0654.7
NC_016024:1876000:1885491188549118865071017Candidatus Chloracidobacterium thermophilum B chromosome chromosomeNADPH:quinone reductase-like Zn-dependent oxidoreductase1e-0654.3
NC_018750:6869675:6881699688169968832251527Streptomyces venezuelae ATCC 10712, complete genomeCrotonyl-CoA carboxylase or reductase,ethylmalonyl-CoA producing1e-0654.3
NC_018691:198909:219020219020220018999Alcanivorax dieselolei B5 chromosome, complete genomeNADPH:quinone reductase-related Zn-dependent oxidoreductase2e-0653.9
NC_013929:8474195:8508271850827185092841014Streptomyces scabiei 87.22 chromosome, complete genomezinc-binding dehydrogenase2e-0653.9
NC_009832:3500000:3503358350335835043771020Serratia proteamaculans 568, complete genomeAlcohol dehydrogenase zinc-binding domain protein3e-0653.1
NC_010501:3448389:346897834689783469901924Pseudomonas putida W619, complete genomeAlcohol dehydrogenase zinc-binding domain protein3e-0653.1
NC_016582:6448430:645429964542996455267969Streptomyces bingchenggensis BCW-1 chromosome, complete genomeoxidoreductase3e-0653.1
NC_012108:1694817:171640917164091717398990Desulfobacterium autotrophicum HRM2, complete genomezinc-containing oxidoreductase4e-0653.1
NC_015671:255808:284283284283285197915Cellvibrio gilvus ATCC 13127 chromosome, complete genomealcohol dehydrogenase zinc-binding domain-containing protein4e-0652.8
NC_008343:88184:1068181068181078491032Granulibacter bethesdensis CGDNIH1, complete genomealcohol dehydrogenase6e-0652.4
NC_014299:82584:854158541586380966Halalkalicoccus jeotgali B3 plasmid 2, complete sequenceAlcohol dehydrogenase GroES domain protein7e-0652
NC_016612:5231065:527327052732705274250981Klebsiella oxytoca KCTC 1686 chromosome, complete genomeNAD(P)H quinone oxidoreductase, PIG3 family protein7e-0652