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Query: NC_010407:410918:423966 Clavibacter michiganensis subsp. sepedonicus chromosome, complete

Start: 423966, End: 424541, Length: 576

Host Lineage: Clavibacter michiganensis; Clavibacter; Microbacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Causative agent of bacterial ring rot. Isolated from infected potato. This organism was first described and classified in 1914 as "Bacterium sepedonicus" and is considered a major plant pathogen. It is a phytopathogenic actinomycete that causes wilt and tuber rot in potato, which is a plant vascular disease with very high bacterial titers. Pathogenicity is believed to be associated with the presence of two plasmids, pCSL1 and pCSL2. This species is subdivided into five subspecies: michiganensis, sepedonicus, nebraskensis, tesselarius and insidiosus each of which infects specific hosts: tomato, potato, corn, wheat and alfalfa, respectively. Members of the Clavibacter genus are known to produce antimicrobial compounds.

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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017955:3731480:373647937364793737048570Modestobacter marinus, complete genomeTetR family transcriptional regulator1e-34145
NC_017955:343931:363277363277363819543Modestobacter marinus, complete genomeTetR family transcriptional regulator2e-1479
NC_015953:46732:673036730367899597Streptomyces sp. SirexAA-E chromosome, complete genomeTetR family transcriptional regulator7e-1373.6
NC_018750:6869675:688342368834236884253831Streptomyces venezuelae ATCC 10712, complete genomeTranscriptional regulator, TetR family1e-1066.2
NC_009142:3943829:394514339451433945880738Saccharopolyspora erythraea NRRL 2338, complete genomeTetR-family transcriptional regulator3e-0858.5
NC_015588:95697:101094101094101801708Isoptericola variabilis 225 chromosome, complete genomeregulatory protein TetR1e-0653.1
NC_013521:1619394:163963316396331640235603Sanguibacter keddieii DSM 10542, complete genometranscriptional regulator, tetR family5e-0650.8