Pre_GI: BLASTP Hits

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Query: NC_010407:410918:418256 Clavibacter michiganensis subsp. sepedonicus chromosome, complete

Start: 418256, End: 418678, Length: 423

Host Lineage: Clavibacter michiganensis; Clavibacter; Microbacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Causative agent of bacterial ring rot. Isolated from infected potato. This organism was first described and classified in 1914 as "Bacterium sepedonicus" and is considered a major plant pathogen. It is a phytopathogenic actinomycete that causes wilt and tuber rot in potato, which is a plant vascular disease with very high bacterial titers. Pathogenicity is believed to be associated with the presence of two plasmids, pCSL1 and pCSL2. This species is subdivided into five subspecies: michiganensis, sepedonicus, nebraskensis, tesselarius and insidiosus each of which infects specific hosts: tomato, potato, corn, wheat and alfalfa, respectively. Members of the Clavibacter genus are known to produce antimicrobial compounds.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012669:2399649:240649924064992406936438Beutenbergia cavernae DSM 12333, complete genomeClass I peptide chain release factor1e-26117
NC_007516:2383097:240162724016272402058432Synechococcus sp. CC9605, complete genomehypothetical protein1e-22105
NC_005070:2308363:232486823248682325302435Synechococcus sp. WH 8102, complete genomehypothetical protein6e-2199.4
NC_009482:2051890:206094720609472061381435Synechococcus sp. RCC307 chromosome, complete genomeprotein chain release factor B3e-2097.1
NC_008820:2595500:259999125999912600422432Prochlorococcus marinus str. MIT 9303, complete genomeClass I peptide chain release factor1e-1995.1
NC_016114:3275004:327754532775453277970426Streptomyces flavogriseus ATCC 33331 chromosome, complete genomeclass I peptide chain release factor8e-1992.4
NC_014541:475350:521390521390521815426Ferrimonas balearica DSM 9799 chromosome, complete genomeClass I peptide chain release factor3e-1270.5
NC_008820:2595500:260884226088422609162321Prochlorococcus marinus str. MIT 9303, complete genomehypothetical protein8e-1165.9
NC_010506:774455:774455774455774868414Shewanella woodyi ATCC 51908, complete genomeClass I peptide chain release factor2e-1064.7
NC_010511:4696868:469806346980634698488426Methylobacterium sp. 4-46 chromosome, complete genomeclass I peptide chain release factor9e-1062.4
NC_014962:826563:843778843778844206429Isosphaera pallida ATCC 43644 chromosome, complete genomeClass I peptide chain release factor1e-0858.5
NC_013960:1484824:149698114969811497409429Nitrosococcus halophilus Nc4 chromosome, complete genomeClass I peptide chain release factor5e-0856.2
NC_014315:2834000:284507328450732845498426Nitrosococcus watsoni C-113 chromosome, complete genomeClass I peptide chain release factor9e-0855.8
NC_008781:2883968:288678728867872887191405Polaromonas naphthalenivorans CJ2, complete genomeClass I peptide chain release factor1e-0652
NC_014364:4416467:442095344209534421366414Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeClass I peptide chain release factor1e-0651.6
NC_020211:4168189:418734241873424187755414Serratia marcescens WW4, complete genomepetidyl-tRNA hydrolase, ribosome-attached2e-0651.2
NC_017986:5867782:588514258851425885579438Pseudomonas putida ND6 chromosome, complete genomepeptidyl-tRNA hydrolase domain-containing protein3e-0650.8
NC_017026:3466809:3466809346680934679241116Mycobacterium tuberculosis RGTB327 chromosome, complete genomepeptide chain release factor 23e-0650.8
NC_009525:3484924:3484924348492434860601137Mycobacterium tuberculosis H37Ra, complete genomepeptide chain release factor 22e-0650.8
NC_002945:3429315:3429315342931534304511137Mycobacterium bovis AF2122/97, complete genomepeptide chain release factor 22e-0650.8
NC_008769:3427254:3427254342725434283901137Mycobacterium bovis BCG str. Pasteur 1173P2, complete genomeputative peptide chain release factor 2 prfB2e-0650.8
NC_014168:1724993:1747719174771917488371119Segniliparus rotundus DSM 44985 chromosome, complete genomepeptide subunit release factor 22e-0650.8
NC_002755:3465582:3468564346856434696791116Mycobacterium tuberculosis CDC1551, complete genomepeptide chain release factor 23e-0650.4
NC_009512:2782000:279086127908612791274414Pseudomonas putida F1, complete genomeClass I peptide chain release factor3e-0650.4
NC_008541:2989500:2989559298955929906741116Arthrobacter sp. FB24 chromosome 1, complete sequencepeptide chain release factor 25e-0650.1