Pre_GI: BLASTP Hits

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Query: NC_010407:3174470:3187392 Clavibacter michiganensis subsp. sepedonicus chromosome, complete

Start: 3187392, End: 3188792, Length: 1401

Host Lineage: Clavibacter michiganensis; Clavibacter; Microbacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Causative agent of bacterial ring rot. Isolated from infected potato. This organism was first described and classified in 1914 as "Bacterium sepedonicus" and is considered a major plant pathogen. It is a phytopathogenic actinomycete that causes wilt and tuber rot in potato, which is a plant vascular disease with very high bacterial titers. Pathogenicity is believed to be associated with the presence of two plasmids, pCSL1 and pCSL2. This species is subdivided into five subspecies: michiganensis, sepedonicus, nebraskensis, tesselarius and insidiosus each of which infects specific hosts: tomato, potato, corn, wheat and alfalfa, respectively. Members of the Clavibacter genus are known to produce antimicrobial compounds.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008309:385592:3877233877233890571335Haemophilus somnus 129PT, complete genomegluconate permease2e-95350
NC_010519:796229:7962297962297975781350Haemophilus somnus 2336 chromosome, complete genomegluconate transporter3e-95349
NC_016801:170876:1976321976321990201389Corynebacterium diphtheriae C7 (beta) chromosome, complete genomegluconate permease1e-88327
NC_016790:134951:1592071592071605951389Corynebacterium diphtheriae VA01 chromosome, complete genomegluconate permease1e-88327
NC_014210:4831858:4832956483295648343891434Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,gluconate transporter2e-64246
NC_013416:16493:2268922689240411353Aggregatibacter actinomycetemcomitans D11S-1, complete genomeGntT protein4e-59229
NC_016513:317197:3250073250073263591353Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completeGntT protein8e-59228
NC_013093:6511108:6511108651110865125021395Actinosynnema mirum DSM 43827, complete genomegluconate transporter5e-57222
NC_016641:4727000:4729601472960147309471347Paenibacillus terrae HPL-003 chromosome, complete genomegluconate permease2e-40167
NC_012214:3750649:3775990377599037773301341Erwinia pyrifoliae Ep1/96, complete genomeLow-affinity gluconate transporter1e-38161
NC_009801:3013838:3040983304098330423471365Escherichia coli E24377A, complete genometransporter, gluconate:H+ symporter (GntP) family3e-38160
NC_012581:1075663:1086709108670910880341326Bacillus anthracis str. CDC 684 chromosome, complete genomegluconate permease3e-38159
NC_017338:2558825:2576706257670625780641359Staphylococcus aureus subsp. aureus JKD6159 chromosome, completeGntP family gluconate:proton (H+) symporter2e-36154
NC_013450:2572530:2590340259034025916981359Staphylococcus aureus subsp. aureus ED98, complete genomegluconate transporter, permease protein2e-36154
NC_009641:2619759:2642311264231126436691359Staphylococcus aureus subsp. aureus str. Newman chromosome,gluconate permease2e-36154
NC_010079:2618345:2636416263641626377741359Staphylococcus aureus subsp. aureus USA300_TCH1516, completeGntP family gluconate:proton (H+) symporter2e-36154
NC_002758:2628000:2645900264590026472581359Staphylococcus aureus subsp. aureus Mu50, complete genomegluconate permease2e-36154
NC_003923:2561953:2584171258417125855291359Staphylococcus aureus subsp. aureus MW2, complete genomegluconate permease2e-36154
NC_002745:2553138:2575474257547425768321359Staphylococcus aureus subsp. aureus N315, complete genomegluconate permease2e-36154
NC_007795:2561928:2584907258490725862651359Staphylococcus aureus subsp. aureus NCTC 8325, complete genomegluconate permease, putative2e-36154
NC_002951:2554511:2572964257296425743221359Staphylococcus aureus subsp. aureus COL, complete genomegluconate transporter, permease protein2e-36154
NC_016912:2433500:2456118245611824574761359Staphylococcus aureus subsp. aureus VC40 chromosome, completegluconate transporter, permease protein2e-36154
NC_017341:2648631:2666532266653226678901359Staphylococcus aureus subsp. aureus str. JKD6008 chromosome,GntP family gluconate:proton (H+) symporter2e-36154
NC_007622:2501562:2511931251193125132891359Staphylococcus aureus RF122, complete genomegluconate permease9e-37154
NC_017342:751496:7582557582557596131359Staphylococcus aureus subsp. aureus TCH60 chromosome, completegluconate:H+ symporter family transporter GntP1e-36154
NC_002952:2653482:2664202266420226655601359Staphylococcus aureus subsp. aureus MRSA252, complete genomeputative gluconate permease1e-36154
NC_017337:2588331:2599424259942426007821359Staphylococcus aureus subsp. aureus ED133 chromosome, completegluconate permease1e-36154
NC_016928:2517691:2540118254011825414761359Staphylococcus aureus subsp. aureus M013 chromosome, completegluconate permease, Bsu4004-like protein1e-36154
NC_009632:2656296:2674131267413126754891359Staphylococcus aureus subsp. aureus JH1 chromosome, completegluconate transporter1e-36154
NC_009487:2656420:2674255267425526756131359Staphylococcus aureus subsp. aureus JH9 chromosome, completegluconate transporter1e-36154
NC_017347:2616000:2631270263127026326281359Staphylococcus aureus subsp. aureus T0131 chromosome, completeGluconate permease2e-36154
NC_017343:2474743:2495553249555324969111359Staphylococcus aureus subsp. aureus ECT-R 2, complete genomegluconate permease2e-36154
NC_011283:2836000:2857599285759928589631365Klebsiella pneumoniae 342 chromosome, complete genomepermease3e-36153
NC_011283:2836000:2840671284067128420351365Klebsiella pneumoniae 342 chromosome, complete genomepermease3e-36153
NC_013850:2846069:2847534284753428488981365Klebsiella variicola At-22 chromosome, complete genomegluconate transporter3e-36153
NC_006905:4638707:4639769463976946412021434Salmonella enterica subsp. enterica serovar Choleraesuis strGntP family, L-idonate transport protein6e-36152
NC_017200:4632000:4637153463715346384781326Bacillus thuringiensis serovar finitimus YBT-020 chromosome,gluconate permease6e-36152
NC_017351:2594171:2611792261179226131501359Staphylococcus aureus subsp. aureus 11819-97 chromosome, completehigh-affinity gluconate transporter5e-36152
NC_012125:4716000:4717083471708347184021320Salmonella enterica subsp. enterica serovar Paratyphi C strainGntP family, L-idonate transport protein8e-36151
NC_011205:4718239:4718239471823947196301392Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853gluconate:H+ symporter family protein9e-36151
NC_011080:4703266:4704328470432847057191392Salmonella enterica subsp. enterica serovar Newport str. SL254,transporter, gluconate:H+ symporter (GntP) family9e-36151
NC_011772:4763542:4766676476667647680011326Bacillus cereus G9842, complete genomegluconate permease2e-35150
NC_008600:4626464:4628854462885446301791326Bacillus thuringiensis str. Al Hakam, complete genomegluconate permease4e-35149
NC_012472:4630485:4632872463287246341971326Bacillus cereus 03BB102, complete genomegluconate permease5e-35149
NC_012483:30784:4424944249456131365Acidobacterium capsulatum ATCC 51196, complete genometransporter, gluconate:H+ symporter (GntP) family9e-35148
NC_012691:241404:2532102532102545291320Tolumonas auensis DSM 9187, complete genomegluconate transporter7e-35148
NC_008563:4905186:4907858490785849091771320Escherichia coli APEC O1, complete genomeL-idonate and D-gluconate transporter3e-34146
NC_011294:4560902:4560902456090245621221221Salmonella enterica subsp. enterica serovar Enteritidis strgnt-II system l-idonate transporter3e-34146
NC_011274:4538722:4538722453872245399421221Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91GNT-II system l-idonate transporter3e-34146
NC_012967:4473368:4474433447443344757521320Escherichia coli B str. REL606 chromosome, complete genomeL-idonate and D-gluconate transporter3e-34146
NC_016832:4649432:4652861465286146543511491Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Gnt-II system L-idonate transporter7e-34145
NC_004631:4661000:4664781466478146662711491Salmonella enterica subsp. enterica serovar Typhi Ty2, complete7e-34145
NC_003198:4676536:4681892468189246833821491Salmonella enterica subsp. enterica serovar Typhi str. CT18,7e-34145
NC_012912:242709:2603992603992617151317Dickeya zeae Ech1591, complete genomegluconate transporter2e-33144
NC_016941:2498299:2521380252138025227381359Staphylococcus aureus subsp. aureus MSHR1132, complete genomeputative gluconate permease4e-33142
NC_016023:1874827:1884996188499618863421347Bacillus coagulans 36D1 chromosome, complete genomegluconate transporter5e-33142
NC_015703:4531578:4535212453521245365281317Runella slithyformis DSM 19594 chromosome, complete genomegluconate transporter3e-32140
NC_016027:1357659:1400153140015314014961344Gluconacetobacter xylinus NBRC 3288, complete genomegluconate permease2e-30134
NC_016582:1018014:1018014101801410194411428Streptomyces bingchenggensis BCW-1 chromosome, complete genomegluconate transporter2e-30133
NC_009922:2721343:2746677274667727480531377Alkaliphilus oremlandii OhILAs, complete genomegluconate transporter6e-30132
NC_011750:4978000:4997413499741349987561344Escherichia coli IAI39 chromosome, complete genomefructuronate transporter1e-29131
NC_009801:4882684:4906902490690249082451344Escherichia coli E24377A, complete genomehigh-affinity gluconate transporter GntP2e-29130
NC_010498:4930649:4954576495457649559191344Escherichia coli SMS-3-5, complete genomehigh-affinity gluconate transporter GntP2e-29130
CP002185:4791811:4812394481239448137371344Escherichia coli W, complete genomefructuronate transporter2e-29130
CU928160:4570498:4610595461059546119381344Escherichia coli IAI1 chromosome, complete genomefructuronate transporter2e-29130
NC_000913:4528278:4547976454797645493191344Escherichia coli K12, complete genomefructuronate transporter2e-29130
NC_002695:5381576:5404775540477554061181344Escherichia coli O157:H7 str. Sakai, complete genomegluconate transport system permease 32e-29130
NC_004431:5123325:5144682514468251460251344Escherichia coli CFT073, complete genomeHigh-affinity gluconate transporter2e-29130
NC_009512:755658:7707397707397721241386Pseudomonas putida F1, complete genomegluconate transporter3e-29130
AC_000091:4534935:4554633455463345559761344Escherichia coli W3110 DNA, complete genomefructuronate transporter2e-29130
CP002516:4199133:4199133419913342004761344Escherichia coli KO11, complete genomegluconate transporter2e-29130
CP002797:4656327:4677849467784946791921344Escherichia coli NA114, complete genomeFructuronate transporter2e-29130
NC_004741:4364235:4364235436423543655781344Shigella flexneri 2a str. 2457T, complete genomegluconate transport system permease 32e-29130
NC_016902:4199133:4199133419913342004761344Escherichia coli KO11FL chromosome, complete genomegluconate transporter2e-29130
NC_013941:5219841:5243056524305652443991344Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeHigh-affinity gluconate transporter2e-29130
NC_013008:5411285:5434484543448454358271344Escherichia coli O157:H7 str. TW14359 chromosome, complete genomefructuronate transporter2e-29130
NC_012967:4510393:4530867453086745322101344Escherichia coli B str. REL606 chromosome, complete genomefructuronate transporter2e-29130
NC_011742:4873351:4892706489270648940491344Escherichia coli S88 chromosome, complete genomefructuronate transporter2e-29130
NC_011741:4570498:4610595461059546119381344Escherichia coli IAI1 chromosome, complete genomefructuronate transporter2e-29130
NC_011353:5455224:5478423547842354797661344Escherichia coli O157:H7 str. EC4115 chromosome, complete genomefructuronate transporter2e-29130
NC_017986:3407913:3430736343073634321211386Pseudomonas putida ND6 chromosome, complete genomegluconate transporter4e-29129
NC_016822:4889656:4911895491189549132381344Shigella sonnei 53G, complete genomefructuronate transporter5e-29129
NC_020064:521500:5235865235865249711386Serratia marcescens FGI94, complete genomegluconate transporter8e-29128
NC_002947:737924:7601527601527615371386Pseudomonas putida KT2440, complete genomegluconate transporter7e-29128
NC_010610:1178430:1219921121992112212671347Lactobacillus fermentum IFO 3956, complete genomegluconate transport protein3e-28126
NC_020210:3341976:3367120336712033684901371Geobacillus sp. GHH01, complete genomegluconate transporter4e-27122
NC_007492:3180480:3221373322137332227581386Pseudomonas fluorescens PfO-1, complete genomeGluconate transporter2e-26120
NC_006511:2819128:2868557286855728700531497Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCpossible permease2e-25117
NC_011147:2814664:2864093286409328655891497Salmonella enterica subsp. enterica serovar Paratyphi A strpermease2e-25117
NC_003197:3005842:3055549305554930570451497Salmonella typhimurium LT2, complete genomeputative permease4e-25116
NC_016860:3029272:3078979307897930804751497Salmonella enterica subsp. enterica serovar Typhimurium strputative permease4e-25116
NC_016810:3028421:3078125307812530796211497Salmonella enterica subsp. enterica serovar Typhimurium strpermease4e-25116
NC_016856:3026426:3075786307578630772821497Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative permease4e-25116
NC_016857:3028421:3078125307812530796211497Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74GntP protein4e-25116
NC_016863:2974333:3024038302403830255341497Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative permease4e-25116
NC_017046:3027161:3076865307686530783611497Salmonella enterica subsp. enterica serovar Typhimurium str. 798permease4e-25116
NC_004631:2872192:2891874289187428933701497Salmonella enterica subsp. enterica serovar Typhi Ty2, completepossible permease4e-25116
NC_011080:2982346:3033797303379730352931497Salmonella enterica subsp. enterica serovar Newport str. SL254,GntP4e-25116
NC_011149:2912219:2965705296570529672011497Salmonella enterica subsp. enterica serovar Agona str. SL483,GntP4e-25116
NC_010102:2967464:3020267302026730217631497Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein4e-25116
NC_011094:2913500:2960886296088629623821497Salmonella enterica subsp. enterica serovar Schwarzengrund strGntP protein4e-25116
NC_011294:2919906:2940308294030829418041497Salmonella enterica subsp. enterica serovar Enteritidis strpermease4e-25116
NC_016832:2859491:2879171287917128806671497Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,putative permease4e-25116
NC_010003:570643:5872715872715886141344Petrotoga mobilis SJ95, complete genomegluconate transporter1e-24114
NC_012125:2938519:2989554298955429910501497Salmonella enterica subsp. enterica serovar Paratyphi C strainpermease1e-24114
NC_016832:3798475:3818580381858038199171338Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,DsdX permease4e-24112
NC_003198:3824187:3844293384429338456301338Salmonella enterica subsp. enterica serovar Typhi str. CT18,DsdX permease4e-24112
NC_004631:3809678:3829783382978338311201338Salmonella enterica subsp. enterica serovar Typhi Ty2, completeDsdX permease4e-24112
NC_006905:3942753:3942753394275339440901338Salmonella enterica subsp. enterica serovar Choleraesuis strputative Gnt family transport protein6e-24112
NC_016831:3779611:3800627380062738019641338Salmonella enterica subsp. enterica serovar Gallinarum/pullorumDsdX permease1e-23111
NC_011274:3799696:3819796381979638211331338Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91permease DsdX1e-23111
NC_009901:4216206:4217550421755042188871338Shewanella pealeana ATCC 700345, complete genomegluconate transporter1e-22107
NC_016831:2867766:2917572291757229190681497Salmonella enterica subsp. enterica serovar Gallinarum/pullorumputative permease4e-22106
NC_008593:640000:6538316538316552011371Clostridium novyi NT, complete genomegluconate permease4e-21103
NC_020063:3690308:3723033372303337243641332Enterobacteriaceae bacterium strain FGI 57, complete genomeD-fructuronate permease7e-21102
NC_004431:2747237:2760235276023527615721338Escherichia coli CFT073, complete genomeDsdX permease6e-21102
CP002797:2472908:2480464248046424818011338Escherichia coli NA114, complete genomeD-serine permease6e-21102
NC_007946:2625461:2639115263911526404521338Escherichia coli UTI89, complete genomehypothetical protein6e-21102
NC_008563:2610499:2611652261165226129891338Escherichia coli APEC O1, complete genomeDsdX permease6e-21102
NC_011750:2585015:2599649259964926009861338Escherichia coli IAI39 chromosome, complete genomepermease DsdX6e-21102
NC_011742:2533500:2534747253474725360841338Escherichia coli S88 chromosome, complete genomepermease DsdX6e-21102
NC_010498:2555706:2568667256866725700041338Escherichia coli SMS-3-5, complete genomegluconate:H+ symporter (GntP) family protein5e-21102
NC_011745:2751437:2752590275259027539271338Escherichia coli ED1a chromosome, complete genomepermease DsdX5e-21102
NC_011750:4390000:4391185439118543925221338Escherichia coli IAI39 chromosome, complete genomepermease DsdX2e-20101
NC_010545:2025000:2025091202509120264911401Corynebacterium urealyticum DSM 7109, complete genomegluconate permease3e-20100
AC_000091:2462461:2483293248329324846301338Escherichia coli W3110 DNA, complete genomepredicted transporter9e-2098.6
NC_009800:2505872:2509252250925225105891338Escherichia coli HS, complete genometransporter, gluconate:H+ symporter (GntP) family9e-2098.6
NC_010473:2548946:2567634256763425689711338Escherichia coli str. K-12 substr. DH10B, complete genomepredicted transporter9e-2098.6
NC_000913:2455037:2475869247586924772061338Escherichia coli K12, complete genomepredicted transporter9e-2098.6
NC_012759:2342986:2361674236167423630111338Escherichia coli BW2952 chromosome, complete genomepermease DsdX9e-2098.6
NC_012967:2409500:2412074241207424134111338Escherichia coli B str. REL606 chromosome, complete genomepermease DsdX9e-2098.6
NC_019978:1022209:1022209102220910235401332Halobacteroides halobius DSM 5150, complete genomegluconate transporter2e-1480.9
NC_016077:388941:3970783970783984631386Acidaminococcus intestini RyC-MR95 chromosome, complete genomegluconate transporter2e-1067.8
NC_012225:512429:5382855382855395651281Brachyspira hyodysenteriae WA1, complete genomegluconate transporter2e-1067.4
NC_013521:2924540:2924540292454029259071368Sanguibacter keddieii DSM 10542, complete genomeH+/gluconate symporter family protein6e-1065.9