Pre_GI: BLASTP Hits

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Query: NC_010407:2038499:2055938 Clavibacter michiganensis subsp. sepedonicus chromosome, complete

Start: 2055938, End: 2056747, Length: 810

Host Lineage: Clavibacter michiganensis; Clavibacter; Microbacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Causative agent of bacterial ring rot. Isolated from infected potato. This organism was first described and classified in 1914 as "Bacterium sepedonicus" and is considered a major plant pathogen. It is a phytopathogenic actinomycete that causes wilt and tuber rot in potato, which is a plant vascular disease with very high bacterial titers. Pathogenicity is believed to be associated with the presence of two plasmids, pCSL1 and pCSL2. This species is subdivided into five subspecies: michiganensis, sepedonicus, nebraskensis, tesselarius and insidiosus each of which infects specific hosts: tomato, potato, corn, wheat and alfalfa, respectively. Members of the Clavibacter genus are known to produce antimicrobial compounds.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008278:2813362:283053228305322831158627Frankia alni ACN14a, complete genomePutative UDP glucose epimerase (partial)2e-38159
NC_015953:4385419:439898643989864399783798Streptomyces sp. SirexAA-E chromosome, complete genomeNAD-dependent epimerase/dehydratase2e-31136
NC_008391:2253188:227620422762042277040837Burkholderia cepacia AMMD chromosome 2, complete sequenceNAD-dependent epimerase/dehydratase4e-29128
NC_007963:2777066:278089527808952781698804Chromohalobacter salexigens DSM 3043, complete genomeNAD-dependent epimerase/dehydratase3e-28125
NC_015856:268034:289332289332290171840Collimonas fungivorans Ter331 chromosome, complete genomeUDP-glucose 4-epimerase1e-25117
NC_016582:4983222:500241250024125003218807Streptomyces bingchenggensis BCW-1 chromosome, complete genomeNAD-dependent epimerase/dehydratase1e-24113
NC_010364:84900:107292107292108059768Halobacterium salinarum R1, complete genomedehydratase homolog1e-23110
NC_002607:81452:107649107649108428780Halobacterium sp. NRC-1, complete genomehypothetical protein1e-23110
NC_011959:1965158:196638519663851967101717Thermomicrobium roseum DSM 5159, complete genomeputative oxidoreductase protein6e-23107
NC_015567:69190:924529245293201750Serratia sp. AS9 chromosome, complete genomeNAD-dependent epimerase/dehydratase5e-2098.2
NC_015566:69190:924529245293201750Serratia sp. AS12 chromosome, complete genomeNAD-dependent epimerase/dehydratase5e-2098.2
NC_009832:110239:134688134688135437750Serratia proteamaculans 568, complete genomeNAD-dependent epimerase/dehydratase8e-2097.8
NC_013406:3975512:399781439978143998590777Paenibacillus sp. Y412MC10 chromosome, complete genomeNAD-dependent epimerase/dehydratase9e-1890.9
NC_019974:1280500:129022912902291291029801Natronococcus occultus SP4, complete genomeNAD dependent epimerase/dehydratase family2e-1789.7
NC_020064:79422:990499904999798750Serratia marcescens FGI94, complete genomeNAD dependent epimerase/dehydratase family protein3e-1685.9
NC_017080:1981788:200399920039992004862864Phycisphaera mikurensis NBRC 102666, complete genomeNAD-dependent epimerase/dehydratase family protein5e-1168.2
NC_015167:1055145:107433710743371075068732Cellulophaga lytica DSM 7489 chromosome, complete genomeNAD-dependent epimerase/dehydratase4e-1065.5
NC_002927:118982:123421123421124398978Bordetella bronchiseptica RB50, complete genomeNAD dependent epimerase/dehydratase family protein1e-0757
NC_002928:123126:127555127555128532978Bordetella parapertussis 12822, complete genomeNAD dependent epimerase/dehydratase family protein1e-0757
NC_009802:1525144:155060615506061551592987Campylobacter concisus 13826, complete genomehypothetical protein4e-0755.5
NC_014365:2359760:237314123731412374049909Desulfarculus baarsii DSM 2075 chromosome, complete genomeNAD-dependent epimerase/dehydratase5e-0651.6