Query: NC_010334:2615260 Shewanella halifaxensis HAW-EB4, complete genome
Start: 2615260, End: 2656599, Length: 41340
Host Lineage: Shewanella halifaxensis; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria
General Information: This strain was isolated from sediment in a munitions-dumping area of the Emerald Basin (depth of 215 m, Atlantic Ocean), offshore of Halifax Harbour (Nova Scotia, Canada). It is capable of efficiently degrading RDX (hexahydro-1,3,5-trinitro-1,3,5-triazine), an explosive compound that contaminates the environment. This bacterium is an obligate respiratory organism.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
| Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
|---|
| NC_004459:2443000* | 2443000 | 2588599 | 145600 | Vibrio vulnificus CMCP6 chromosome I, complete sequence | 1e-31 | 147 | BLASTN svg | BLASTP svg |
| NC_011753:2018500 | 2018500 | 2036234 | 17735 | Vibrio splendidus LGP32 chromosome 1, complete genome | 3e-29 | 139 | BLASTN svg | BLASTP svg |
| NC_009997:2069894 | 2069894 | 2091599 | 21706 | Shewanella baltica OS195, complete genome | 6e-21 | 111 | BLASTN svg | BLASTP svg |
| NC_013456:1819421* | 1819421 | 1840387 | 20967 | Vibrio sp. Ex25 chromosome 1, complete genome | 1e-18 | 103 | BLASTN svg | BLASTP svg |
| NC_005139:1784000 | 1784000 | 1927839 | 143840 | Vibrio vulnificus YJ016 chromosome I, complete sequence | 2e-17 | 99.6 | BLASTN svg | BLASTP svg |
| NC_004603:1897532 | 1897532 | 1936075 | 38544 | Vibrio parahaemolyticus RIMD 2210633 chromosome I, complete | 3e-16 | 95.6 | BLASTN svg | BLASTP svg |
| NC_008577:3485878 | 3485878 | 3508992 | 23115 | Shewanella sp. ANA-3 chromosome 1, complete sequence | 1e-15 | 93.7 | BLASTN svg | BLASTP svg |
| NC_013456:1743046 | 1743046 | 1769118 | 26073 | Vibrio sp. Ex25 chromosome 1, complete genome | 5e-15 | 91.7 | BLASTN svg | BLASTP svg |
| NC_009997:2699644 | 2699644 | 2722183 | 22540 | Shewanella baltica OS195, complete genome | 2e-14 | 89.7 | BLASTN svg | BLASTP svg |
| NC_014366:3653190* | 3653190 | 3676104 | 22915 | Gamma proteobacterium HdN1, complete genome | 3e-13 | 85.7 | BLASTN svg | BLASTP svg |
| NC_004460:1618892 | 1618892 | 1638768 | 19877 | Vibrio vulnificus CMCP6 chromosome II, complete sequence | 1e-12 | 83.8 | BLASTN svg | BLASTP svg |
| NC_009901:4216206 | 4216206 | 4236721 | 20516 | Shewanella pealeana ATCC 700345, complete genome | 2e-11 | 79.8 | BLASTN svg | BLASTP svg |
| NC_009901:2272206 | 2272206 | 2309985 | 37780 | Shewanella pealeana ATCC 700345, complete genome | 2e-11 | 79.8 | BLASTN svg | BLASTP svg |
| NC_005140:340000 | 340000 | 362329 | 22330 | Vibrio vulnificus YJ016 chromosome II, complete sequence | 8e-11 | 77.8 | BLASTN svg | BLASTP svg |
| NC_007954:2440000* | 2440000 | 2463255 | 23256 | Shewanella denitrificans OS217, complete genome | 2e-08 | 69.9 | BLASTN svg | BLASTP svg |