Pre_GI: BLASTP Hits

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Query: NC_010334:4925936:4932415 Shewanella halifaxensis HAW-EB4, complete genome

Start: 4932415, End: 4932630, Length: 216

Host Lineage: Shewanella halifaxensis; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from sediment in a munitions-dumping area of the Emerald Basin (depth of 215 m, Atlantic Ocean), offshore of Halifax Harbour (Nova Scotia, Canada). It is capable of efficiently degrading RDX (hexahydro-1,3,5-trinitro-1,3,5-triazine), an explosive compound that contaminates the environment. This bacterium is an obligate respiratory organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_005139:796546:813042813042813236195Vibrio vulnificus YJ016 chromosome I, complete sequencepredicted transcriptional regulator6e-1269.3
NC_005139:2201820:227257322725732272794222Vibrio vulnificus YJ016 chromosome I, complete sequencepredicted transcriptional regulator8e-1268.9
NC_002505:1931750:193580119358011936007207Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completetranscriptional regulator9e-1165.5
NC_009457:1444449:148890414889041489110207Vibrio cholerae O395 chromosome 2, complete sequencetranscriptional regulator9e-1165.5
NC_012578:1838470:188293418829341883140207Vibrio cholerae M66-2 chromosome I, complete sequencetranscriptional regulator9e-1165.5
NC_012582:2013515:202032320203232020529207Vibrio cholerae O395 chromosome chromosome I, complete sequencetranscriptional regulator9e-1165.5
NC_012668:1688500:171150017115001711706207Vibrio cholerae MJ-1236 chromosome 1, complete sequencetranscriptional regulator9e-1165.5
NC_016944:1978058:198210919821091982315207Vibrio cholerae IEC224 chromosome I, complete sequencetranscriptional regulator9e-1165.5
NC_008322:2077628:209572820957282095949222Shewanella sp. MR-7, complete genomephage transcriptional regulator, AlpA2e-1064.3
NC_006511:4465495:446677144667714467101331Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC8e-1062.4
NC_009901:1516340:153082715308271531030204Shewanella pealeana ATCC 700345, complete genomephage transcriptional regulator, AlpA8e-1062.4
NC_015731:1578106:159965415996541599836183Nitrosomonas sp. Is79A3 chromosome, complete genomephage transcriptional regulator AlpA1e-0962
NC_017270:1755552:177452717745271774703177Vibrio cholerae LMA3984-4 chromosome chromosome I, completetranscriptional regulator1e-0962
NC_016445:1363831:140720214072021407378177Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completetranscriptional regulator1e-0962
NC_011147:4460726:446200144620014462267267Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein1e-0961.6
NC_009092:1441813:145459814545981454783186Shewanella loihica PV-4, complete genomephage transcriptional regulator, AlpA2e-0961.2
NC_002505:514732:530402530402530602201Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completetranscriptional regulator3e-0960.8
NC_012668:83641:897378973789937201Vibrio cholerae MJ-1236 chromosome 1, complete sequencetranscriptional regulator3e-0960.8
NC_016944:514742:530410530410530610201Vibrio cholerae IEC224 chromosome I, complete sequencetranscriptional regulator3e-0960.8
NC_021066:5342127:535911053591105359376267Raoultella ornithinolytica B6, complete genomephage DNA binding protein2e-0960.8
NC_015424:3520783:355680435568043556980177Aeromonas veronii B565 chromosome, complete genomeputative transcriptional regulator2e-0960.8
NC_013456:2984491:299468929946892994889201Vibrio sp. Ex25 chromosome 1, complete genomephage transcriptional regulator AlpA4e-0960.5
NC_009439:1297851:130657513065751306763189Pseudomonas mendocina ymp, complete genomephage transcriptional regulator, AlpA4e-0960.1
NC_013508:3593000:360746636074663607687222Edwardsiella tarda EIB202, complete genomehypothetical protein7e-0959.3
NC_016845:575123:589780589780590046267Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,phage DNA binding protein1e-0858.9
NC_010102:2862178:286427828642782864544267Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein1e-0858.2
NC_014121:677799:691347691347691613267Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completephage transcriptional regulator, AlpA1e-0858.2
NC_011080:2870428:288471228847122884978267Salmonella enterica subsp. enterica serovar Newport str. SL254,phage DNA binding protein1e-0858.2
NC_016631:2051475:205836320583632058578216Granulicella mallensis MP5ACTX8 chromosome, complete genomephage transcriptional regulator, AlpA2e-0857.8
NC_016857:2871689:289653928965392896805267Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74phage DNA binding protein2e-0857.8
NC_009778:567000:596545596545596727183Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein2e-0857.8
NC_012917:833721:838409838409838669261Pectobacterium carotovorum subsp. carotovorum PC1, complete genomephage transcriptional regulator, AlpA2e-0857.8
NC_008321:1993541:201135520113552011549195Shewanella sp. MR-4, complete genomephage transcriptional regulator, AlpA2e-0857.4
NC_012668:1688500:169464616946461694876231Vibrio cholerae MJ-1236 chromosome 1, complete sequencehypothetical protein3e-0857.4
NC_018691:3525430:356425235642523564566315Alcanivorax dieselolei B5 chromosome, complete genomePhage transcriptional regulator, AlpA4e-0857
NC_020211:996497:100966210096621009928267Serratia marcescens WW4, complete genomehypothetical protein4e-0857
NC_007347:2421942:242194224219422422205264Ralstonia eutropha JMP134 chromosome 1, complete sequenceProphage CP4-57 regulatory4e-0857
NC_015224:3291736:331240633124063312600195Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,phage transcriptional regulator, AlpA3e-0857
NC_009436:3367194:338079433807943381060267Enterobacter sp. 638, complete genomephage transcriptional regulator, AlpA6e-0856.2
NC_010322:5293652:531510753151075315289183Pseudomonas putida GB-1 chromosome, complete genomephage transcriptional regulator AlpA8e-0855.8
NC_011283:1811000:185314418531441853353210Klebsiella pneumoniae 342 chromosome, complete genometranscriptional regulator AlpA family1e-0755.5
NC_005085:659378:678312678312678530219Chromobacterium violaceum ATCC 12472, complete genomeprobable prophage regulatory protein2e-0754.7
NC_012917:3684840:368998636899863690246261Pectobacterium carotovorum subsp. carotovorum PC1, complete genomephage transcriptional regulator, AlpA2e-0754.3
NC_017270:1755552:178876517887651788965201Vibrio cholerae LMA3984-4 chromosome chromosome I, completetranscriptional regulator, AlpA like protein3e-0754.3
NC_010498:4072681:408781140878114088077267Escherichia coli SMS-3-5, complete genomeAlpA family transcriptional regulator3e-0753.9
NC_010468:1130000:115080511508051151071267Escherichia coli ATCC 8739, complete genomephage transcriptional regulator, AlpA3e-0753.9
NC_007613:4217557:422168542216854221951267Shigella boydii Sb227, complete genomehypothetical protein3e-0753.9
NC_011740:448000:452630452630452896267Escherichia fergusonii ATCC 35469, complete genomeconserved hypothetical protein of bacteriophage origin, putative COG3311, putative DNA binding3e-0753.9
NC_013361:4959323:495991949599194960185267Escherichia coli O26:H11 str. 11368 chromosome, complete genomeDNA binding transcriptional regulator3e-0753.9
NC_004631:4661000:467373846737384674061324Salmonella enterica subsp. enterica serovar Typhi Ty2, completephage DNA binding protein3e-0753.9
NC_003198:4676536:469084946908494691172324Salmonella enterica subsp. enterica serovar Typhi str. CT18,phage DNA binding protein3e-0753.9
NC_010468:49074:496614966149927267Escherichia coli ATCC 8739, complete genomephage transcriptional regulator, AlpA3e-0753.9
NC_003143:2137945:213871521387152138996282Yersinia pestis CO92, complete genomeputative transcriptional regulator4e-0753.5
NC_008150:1420825:142179414217941422075282Yersinia pestis Antiqua, complete genomehypothetical protein4e-0753.5
NC_005810:1794490:179545917954591795740282Yersinia pestis biovar Microtus str. 91001, complete genomeputative transcriptional regulator4e-0753.5
NC_014306:4376012:441108144110814411347267Erwinia billingiae Eb661, complete genomePhage transcriptional regulator, AlpA-family5e-0753.1
NC_010501:4787963:479311447931144793338225Pseudomonas putida W619, complete genomephage transcriptional regulator, AlpA5e-0753.1
NC_008322:2077628:208644320864432086655213Shewanella sp. MR-7, complete genomephage transcriptional regulator, AlpA7e-0752.8
NC_010634:1916000:191718019171801917365186Yersinia pseudotuberculosis PB1/+, complete genomephage transcriptional regulator, AlpA7e-0752.8
NC_009381:1362471:139729913972991397484186Yersinia pestis Pestoides F chromosome, complete genometranscriptional regulator7e-0752.8
NC_012731:3411161:342822134282213428406186Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomeputative transcriptional regulator7e-0752.8
NC_014306:4901390:494030849403084940574267Erwinia billingiae Eb661, complete genomePhage transcriptional regulator, AlpA-family6e-0752.8
NC_013421:1819036:184166718416671841861195Pectobacterium wasabiae WPP163, complete genomephage transcriptional regulator, AlpA8e-0752.4
NC_016818:1795576:183513518351351835329195Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completeputative transcriptional regulator8e-0752.4
NC_014500:3097362:314293231429323143126195Dickeya dadantii 3937 chromosome, complete genomeDNA-binding protein9e-0752.4
NC_004547:1873390:188101818810181881212195Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeputative prophage regulatory protein1e-0652
NC_007925:1085500:108685210868521087058207Rhodopseudomonas palustris BisB18, complete genomephage transcriptional regulator, AlpA2e-0651.6
NC_013592:2968500:299374929937492993943195Dickeya dadantii Ech586, complete genomephage transcriptional regulator, AlpA1e-0651.6
NC_011080:4703266:471759947175994717859261Salmonella enterica subsp. enterica serovar Newport str. SL254,phage transcriptional regulator, AlpA1e-0651.6
NC_014972:247028:265810265810266025216Desulfobulbus propionicus DSM 2032 chromosome, complete genomephage transcriptional regulator, AlpA1e-0651.6
NC_015379:908904:935089935089935310222Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,Putative transcription factor, AlpA family1e-0651.6
NC_012912:1701231:171525317152531715447195Dickeya zeae Ech1591, complete genomephage transcriptional regulator, AlpA1e-0651.6
NC_012880:4117376:412043941204394120642204Dickeya dadantii Ech703, complete genomephage transcriptional regulator, AlpA2e-0651.2
NC_012912:4194821:419819641981964198399204Dickeya zeae Ech1591, complete genomephage transcriptional regulator, AlpA2e-0651.2
NC_013592:4295449:430099243009924301195204Dickeya dadantii Ech586, complete genomephage transcriptional regulator, AlpA2e-0651.2
NC_014500:443874:459413459413459616204Dickeya dadantii 3937 chromosome, complete genomeDNA-binding protein2e-0651.2
NC_008435:1131242:116366511636651163880216Rhodopseudomonas palustris BisA53, complete genomephage transcriptional regulator, AlpA3e-0650.4
NC_007925:138927:166679166679166894216Rhodopseudomonas palustris BisB18, complete genomephage transcriptional regulator, AlpA5e-0650.1
NC_017047:2079368:208454920845492084743195Rahnella aquatilis HX2 chromosome, complete genomeputative prophage regulatory protein5e-0650.1
NC_010694:2716348:273867627386762738873198Erwinia tasmaniensis, complete genomePutative hypothetical protein (prophage CP4-57 regulatory protein)6e-0649.7
NC_007969:2885249:289003828900382890298261Psychrobacter cryohalolentis K5, complete genomephage transcriptional regulator, AlpA8e-0648.9