Pre_GI: BLASTP Hits

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Query: NC_010334:4925936:4925936 Shewanella halifaxensis HAW-EB4, complete genome

Start: 4925936, End: 4926835, Length: 900

Host Lineage: Shewanella halifaxensis; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from sediment in a munitions-dumping area of the Emerald Basin (depth of 215 m, Atlantic Ocean), offshore of Halifax Harbour (Nova Scotia, Canada). It is capable of efficiently degrading RDX (hexahydro-1,3,5-trinitro-1,3,5-triazine), an explosive compound that contaminates the environment. This bacterium is an obligate respiratory organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008687:965152:989964989964990845882Paracoccus denitrificans PD1222 chromosome 2, complete sequencebinding-protein-dependent transport systems inner membrane component5e-100364
NC_014923:79370:856258562586512888Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, completebinding-protein-dependent transport systems inner membrane component7e-93340
NC_006347:3805500:380706738070673807891825Bacteroides fragilis YCH46, complete genomeglycine betaine/L-proline transport system permease2e-49196
NC_006582:1138987:116018511601851161021837Bacillus clausii KSM-K16, complete genomeglycine betaine ABC transporter permease7e-49194
NC_010002:2933909:2935066293506629362651200Delftia acidovorans SPH-1, complete genomebinding-protein-dependent transport systems inner membrane component1e-47190
NC_004557:2475030:247973424797342480561828Clostridium tetani E88, complete genomeputative glycine-betaine binding permease protein2e-47189
NC_009615:4693164:469577346957734696588816Parabacteroides distasonis ATCC 8503 chromosome, complete genomeglycine betaine/L-proline transport system permease3e-47188
NC_020207:2240115:2253560225356022552871728Enterococcus faecium NRRL B-2354, complete genomeGlycine betaine ABC transport permease OpuABC1e-46187
NC_015733:2581324:2584695258469525866471953Pseudomonas putida S16 chromosome, complete genomebinding-protein-dependent transport systems inner membrane component4e-45181
NC_016002:2591189:260637826063782607247870Pseudogulbenkiania sp. NH8B, complete genomeABC transporter permease6e-45181
NC_009381:1783886:1821090182109018222441155Yersinia pestis Pestoides F chromosome, complete genomeglycine betaine transporter membrane protein7e-45181
NC_015733:2581324:262021326202132621145933Pseudomonas putida S16 chromosome, complete genomebinding-protein-dependent transport systems inner membrane component1e-44179
NC_003552:2634828:265639026563902657220831Methanosarcina acetivorans C2A, complete genomeglycine betaine/L-proline ABC transporter, permease1e-43177
NC_014210:5370868:5382898538289853841271230Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,binding-protein-dependent transport systems inner membrane component2e-43176
NC_007492:3180480:3205029320502932071252097Pseudomonas fluorescens PfO-1, complete genomeGlycine betaine/L-proline ABC transporter, ATPase/permease fusion protein, putative1e-43176
NC_015556:1188500:120853012085301209429900Pseudomonas fulva 12-X chromosome, complete genomebinding-protein-dependent transport systems inner membrane component3e-42172
NC_010505:2657683:265864226586422659493852Methylobacterium radiotolerans JCM 2831, complete genomebinding-protein-dependent transport systems inner membrane component4e-42171
NC_007952:1587500:158958115895811590483903Burkholderia xenovorans LB400 chromosome 2, complete sequenceABC proline/glycine betaine transporter, inner membrane subunit6e-42171
NC_004193:3578710:359297735929773593837861Oceanobacillus iheyensis HTE831, complete genomeglycine betaine ABC transporter permease3e-41169
NC_005071:588541:609012609012609926915Prochlorococcus marinus str. MIT 9313, complete genomeABC transporter,membrane component, glycine betaine/proline family3e-38159
NC_008148:1567703:157570915757091576575867Rubrobacter xylanophilus DSM 9941, complete genomebinding-protein-dependent transport systems inner membrane component5e-38158
NC_019978:2036779:205052220505222051355834Halobacteroides halobius DSM 5150, complete genomeABC-type proline/glycine betaine transport system, permease component1e-37157
NC_002678:6061448:6061448606144860634271980Mesorhizobium loti MAFF303099, complete genomeABC transporter permease protein5e-36151
NC_003305:1035342:105860510586051059453849Agrobacterium tumefaciens str. C58 chromosome linear, completeABC transporter, membrane spanning protein5e-36151
NC_005791:837505:858699858699859532834Methanococcus maripaludis S2, complete genomeABC-type proline/glycine betaine transport system, permease component related protein1e-35150
NC_015847:909938:930852930852931685834Methanococcus maripaludis XI chromosome, complete genomebinding-protein dependent transport system inner membrane protein1e-35150
NC_014222:1:147021470215538837Methanococcus voltae A3 chromosome, complete genomebinding-protein-dependent transport systems inner membrane component4e-35148
NC_015379:4426827:444064944406494441497849Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,Glycine betaine ABC transporter, permease component4e-35148
NC_008343:88184:942259422595076852Granulibacter bethesdensis CGDNIH1, complete genomeglycine betaine/L-proline transport system permease protein proW5e-35148
NC_003305:1035342:105775710577571058608852Agrobacterium tumefaciens str. C58 chromosome linear, completeABC transporter, membrane spanning protein1e-32140
NC_018643:857911:8579118579118600642154Alpha proteobacterium HIMB5 chromosome, complete genomeBinding-protein-dependent transport system inner membrane component7e-30131
NC_016625:171341:185846185846186688843Burkholderia sp. YI23 chromosome 2, complete sequenceABC transporter permease3e-28125
NC_016625:171341:186685186685187530846Burkholderia sp. YI23 chromosome 2, complete sequencehypothetical protein4e-27122
NC_015379:4426827:443980444398044440652849Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,Glycine betaine ABC transporter, permease component4e-27122
NC_016023:1143130:1143130114313011446591530Bacillus coagulans 36D1 chromosome, complete genomeglycine betaine ABC transporter periplasmic protein3e-1892.8
NC_013520:1905554:1927618192761819291501533Veillonella parvula DSM 2008, complete genomeSubstrate-binding region of ABC-type glycine betaine transport system1e-1584.3
NC_015425:2528549:2560000256000025615861587Clostridium botulinum BKT015925 chromosome, complete genomeputative glycine betaine/carnitine/choline ABC transporter3e-1582.4
NC_016605:50695:6941669416709451530Pediococcus claussenii ATCC BAA-344 chromosome, complete genomesubstrate binding domain of ABC-type glycine betaine transport system family protein1e-1480.5
NC_011999:1567818:158318915831891583833645Macrococcus caseolyticus JCSC5402, complete genomeglycine betaine/carnitine/choline ABC transporter, permease protein2e-1480.1
NC_016047:3406488:342286934228693423522654Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completecholine transport system permease opuBB2e-1480.1
NC_013406:5066769:510984751098475110548702Paenibacillus sp. Y412MC10 chromosome, complete genomebinding-protein-dependent transport systems inner membrane component2e-1479.7
NC_009495:1759759:1776428177642817780141587Clostridium botulinum A str. ATCC 3502 chromosome, complete genomeglycine betaine/L-proline ABC transporter permease/substrate-binding protein3e-1479.3
NC_009727:1899876:1899876189987619014561581Coxiella burnetii Dugway 7E9-12, complete genomeABC transporter, quaternary amine uptake transporter (QAT) family, permease/periplasmic amine-binding protein4e-1479
NC_014315:2711852:2731698273169827332031506Nitrosococcus watsoni C-113 chromosome, complete genomeglycine betaine ABC transporter substrate-binding protein4e-1479
NC_014479:3245126:326511132651113265764654Bacillus subtilis subsp. spizizenii str. W23 chromosome, completecholine ABC transporter permease3e-1479
NC_014209:1580423:159879915987991599437639Thermoanaerobacter mathranii subsp. mathranii str. A3 chromosome,binding-protein-dependent transport systems inner membrane component5e-1478.6
NC_014614:6115:392333923339889657Clostridium sticklandii, complete genomeGlycine betaine transport system permease protein / Glycine betaine-binding protein (fragment)2e-1377
NC_014479:3245126:326349132634913264162672Bacillus subtilis subsp. spizizenii str. W23 chromosome, completecholine ABC transporter permease3e-1376.3
NC_016047:3406488:342124934212493421920672Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completecholine transport system permease opuBD3e-1376.3
NC_013406:5066769:510821851082185108883666Paenibacillus sp. Y412MC10 chromosome, complete genomebinding-protein-dependent transport systems inner membrane component5e-1272
NC_015589:3241364:324228832422883242905618Desulfotomaculum ruminis DSM 2154 chromosome, complete genomebinding-protein-dependent transport systems inner membrane component5e-1272
NC_008525:270310:2858552858552873841530Pediococcus pentosaceus ATCC 25745, complete genomeABC-type proline/glycine betaine transport system, permease and substrate binding protein6e-1271.6
NC_014479:3245126:326906732690673269741675Bacillus subtilis subsp. spizizenii str. W23 chromosome, completeglycine betaine/carnitine/choline/choline sulfate ABC transporter permease8e-1271.2
NC_016047:3406488:342553434255343426202669Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completeglycine betaine/carnitine/choline transport system permease OpuCD1e-1170.9
NC_004461:205068:213697213697214332636Staphylococcus epidermidis ATCC 12228, complete genomeopuCB protein1e-1170.5
NC_021175:881845:8818458818458833651521Streptococcus oligofermentans AS 1.3089, complete genomecholine ABC transporter permease2e-1170.1
NC_006510:310212:341910341910342539630Geobacillus kaustophilus HTA426, complete genomehypothetical protein2e-1169.7
NC_016593:353505:379641379641380270630Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completebinding-protein-dependent transport system inner membrane component2e-1169.7
NC_014915:308056:325858325858326487630Geobacillus sp. Y412MC52 chromosome, complete genomebinding-protein-dependent transport systems inner membrane component2e-1169.7
NC_013411:1168049:118585111858511186480630Geobacillus sp. Y412MC61, complete genomebinding-protein-dependent transport systems inner membrane component2e-1169.7
NC_009328:293000:312108312108312737630Geobacillus thermodenitrificans NG80-2 chromosome, complete genomeglycine betaine/L-proline ABC transporter permease3e-1169.3
NC_010718:128423:143328143328144173846Natranaerobius thermophilus JW/NM-WN-LF, complete genomebinding-protein-dependent transport systems inner membrane component6e-1168.2
NC_011999:1567818:158473315847331585425693Macrococcus caseolyticus JCSC5402, complete genomeglycine betaine/carnitine/choline ABC transporter, permease protein1e-1067.8
NC_007576:1854136:1854136185413618556621527Lactobacillus sakei subsp. sakei 23K, complete genomePutative glycine/betaine/carnitine/choline ABC transporter, substrate binding and membrane-spanning subunits2e-1067
NC_010718:128423:141500141500142150651Natranaerobius thermophilus JW/NM-WN-LF, complete genomebinding-protein-dependent transport systems inner membrane component3e-1066.2
NC_014206:345499:376734376734377363630Geobacillus sp. C56-T3 chromosome, complete genomebinding-protein-dependent transporters inner membrane component7e-1064.7
NC_008595:312861:312178312178312864687Mycobacterium avium 104, complete genomeABC transporter, permease protein2e-0963.2
NC_015172:951550:955589955589956377789Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomebinding-protein-dependent transport systems inner membrane component2e-0963.2
NC_002944:292974:292974292974293660687Mycobacterium avium subsp. paratuberculosis K-10, complete genomeProW3e-0962.8
NC_012526:4462:190471904719766720Deinococcus deserti VCD115, complete genomeputative proline/glycine betaine3e-0962.8
NC_015565:1163148:116623311662331167036804Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completeABC transporter integral membrane protein3e-0962.8
NC_014121:2247913:226354522635452264255711Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeputative osmoprotectant transport system permease protein3e-0962.8
NC_014377:210888:220474220474221115642Thermosediminibacter oceani DSM 16646 chromosome, complete genomebinding-protein-dependent transport systems inner membrane component3e-0962.8
NC_007963:2644930:264611626461162646847732Chromohalobacter salexigens DSM 3043, complete genomebinding-protein-dependent transport systems inner membrane component5e-0962
NC_020260:1111130:1112092111209211132251134Cronobacter sakazakii Sp291, complete genomeosmoprotectant uptake system permease YehY5e-0962
NC_018515:4196409:422204142220414222697657Desulfosporosinus meridiei DSM 13257 chromosome, complete genomeproline/glycine betaine ABC transporter permease8e-0961.2
NC_009778:1070000:1070004107000410711371134Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein8e-0961.2
NC_016514:891772:933689933689934516828Enterobacter cloacae EcWSU1 chromosome, complete genomeTaurine transport system permease protein tauC1e-0860.8
NC_012883:1695703:169570316957031696320618Thermococcus sibiricus MM 739, complete genomeOsmoprotection protein (proW-1)1e-0860.5
NC_012883:1695703:169630716963071696936630Thermococcus sibiricus MM 739, complete genomeOsmoprotection protein (proW-2)2e-0860.1
NC_004461:205068:215313215313215960648Staphylococcus epidermidis ATCC 12228, complete genomeopuCD protein4e-0858.9
NC_007907:2830574:283883128388312839589759Desulfitobacterium hafniense Y51, complete genomehypothetical protein4e-0858.9
NC_015278:538500:5586705586705602111542Aerococcus urinae ACS-120-V-Col10a chromosome, complete genometoxin-antitoxin system toxin component, PIN family5e-0858.5
NC_009778:1070000:107206410720641072795732Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein6e-0858.5
NC_014209:1363151:136980713698071370460654Thermoanaerobacter mathranii subsp. mathranii str. A3 chromosome,binding-protein-dependent transport systems inner membrane component9e-0857.8
NC_015275:521436:533624533624534400777Clostridium lentocellum DSM 5427 chromosome, complete genomeABC-type transporter, integral membrane subunit1e-0757.4
NC_013921:1344000:134976213497621350415654Thermoanaerobacter italicus Ab9 chromosome, complete genomebinding-protein-dependent transport systems inner membrane component1e-0757
NC_018515:4196409:422021942202194220863645Desulfosporosinus meridiei DSM 13257 chromosome, complete genomeproline/glycine betaine ABC transporter permease1e-0757
NC_014538:1125000:113976011397601140413654Thermoanaerobacter sp. X513 chromosome, complete genomebinding-protein-dependent transport systems inner membrane component1e-0757
NC_014964:1353939:135956813595681360221654Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, completebinding-protein-dependent transport systems inner membrane component1e-0757
NC_010320:1769486:177396917739691774622654Thermoanaerobacter sp. X514 chromosome, complete genomebinding-protein-dependent transport system inner membrane protein1e-0757
NC_010321:1361748:136737713673771368030654Thermoanaerobacter pseudethanolicus ATCC 33223 chromosome, completebinding-protein-dependent transport system inner membrane protein1e-0757
NC_015958:1465631:147187814718781472531654Thermoanaerobacter wiegelii Rt8.B1 chromosome, complete genomeABC transporter integral membrane subunit1e-0757
NC_009512:1025365:102536510253651026078714Pseudomonas putida F1, complete genomebinding-protein-dependent transport systems inner membrane component2e-0756.6
NC_021182:4186515:420359942035994204381783Clostridium pasteurianum BC1, complete genomeABC-type nitrate/sulfonate/bicarbonate transport system, permease component3e-0756.2
NC_009925:647752:652404652404653033630Acaryochloris marina MBIC11017, complete genomebinding-protein-dependent inner membrane transport system, putative4e-0755.8
NC_015589:870804:882372882372883175804Desulfotomaculum ruminis DSM 2154 chromosome, complete genomebinding-protein-dependent transport systems inner membrane component5e-0755.5
NC_009792:2688747:271131327113132711945633Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein8e-0754.7
NC_020260:1111130:111415211141521114883732Cronobacter sakazakii Sp291, complete genomeosmoprotectant uptake system permease YehW9e-0754.3
NC_008148:583030:608239608239608946708Rubrobacter xylanophilus DSM 9941, complete genomebinding-protein-dependent transport systems inner membrane component2e-0653.5
NC_012225:345704:354194354194354964771Brachyspira hyodysenteriae WA1, complete genometaurine ABC transporter, permease protein3e-0653.1
NC_018750:7653000:767445576744557675315861Streptomyces venezuelae ATCC 10712, complete genomeABC transporter permease3e-0653.1
NC_014121:2247913:226518222651822265829648Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeputative osmoprotectant transport system permease protein2e-0653.1
NC_018607:290500:310784310784311554771Brachyspira pilosicoli B2904 chromosome, complete genometaurine ABC transporter permease2e-0653.1
NC_014394:808734:823666823666824496831Gallionella capsiferriformans ES-2 chromosome, complete genomebinding-protein-dependent transport systems inner membrane component3e-0652.8
NC_009792:2688747:271069327106932711316624Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein4e-0652.4
NC_012526:4462:2070020700218811182Deinococcus deserti VCD115, complete genomeputative proline/glycine betaine4e-0652.4
NC_015589:3241364:324292832429283243569642Desulfotomaculum ruminis DSM 2154 chromosome, complete genomebinding-protein-dependent transport systems inner membrane component5e-0652
NC_009255:1105786:111302611130261113838813Burkholderia vietnamiensis G4 chromosome 2, complete sequencebinding-protein-dependent transport system inner membrane protein5e-0652
NC_013510:1637730:165631716563171657126810Thermomonospora curvata DSM 43183, complete genomebinding-protein-dependent transport systems inner membrane component7e-0651.6
NC_014034:1507047:151154715115471512371825Rhodobacter capsulatus SB1003 chromosome, complete genomeABC transporter permease7e-0651.6
NC_017100:2383487:238348723834872384161675Acetobacter pasteurianus IFO 3283-03, complete genomeD-methionine transporter permease protein6e-0651.6
NC_017125:2383467:238346723834672384141675Acetobacter pasteurianus IFO 3283-22, complete genomeD-methionine transporter permease protein6e-0651.6
NC_017146:2383509:238350923835092384183675Acetobacter pasteurianus IFO 3283-26, complete genomeD-methionine transporter permease protein6e-0651.6
NC_017150:2290681:229002622900262290700675Acetobacter pasteurianus IFO 3283-01-42C, complete genomeD-methionine transporter permease protein6e-0651.6
NC_009717:271385:284242284242285015774Xanthobacter autotrophicus Py2 plasmid pXAUT01, complete sequencebinding-protein-dependent transport systems inner membrane component9e-0651.2
NC_011145:4628000:465062946506294651366738Anaeromyxobacter sp. K, complete genomebinding-protein-dependent transport systems inner membrane component1e-0550.8