Pre_GI: BLASTP Hits

Some Help

Query: NC_010334:2749250:2757463 Shewanella halifaxensis HAW-EB4, complete genome

Start: 2757463, End: 2758440, Length: 978

Host Lineage: Shewanella halifaxensis; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from sediment in a munitions-dumping area of the Emerald Basin (depth of 215 m, Atlantic Ocean), offshore of Halifax Harbour (Nova Scotia, Canada). It is capable of efficiently degrading RDX (hexahydro-1,3,5-trinitro-1,3,5-triazine), an explosive compound that contaminates the environment. This bacterium is an obligate respiratory organism.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009901:2427291:244584524458452446822978Shewanella pealeana ATCC 700345, complete genometype II secretion system protein8e-140496
NC_016613:2759908:277448427744842775452969Vibrio sp. EJY3 chromosome 1, complete sequencetight adherence TadB-like transmembrane protein7e-39161
NC_007614:2675302:267990926799092680880972Nitrosospira multiformis ATCC 25196 chromosome 1, completetype II secretion system protein6e-26118
NC_016002:2453919:249578124957812496755975Pseudogulbenkiania sp. NH8B, complete genometype II secretion system F domain containing protein3e-25116
NC_011769:3434744:346271734627173463682966Desulfovibrio vulgaris str. 'Miyazaki F', complete genometype II secretion system protein6e-25115
NC_007794:1553000:156780915678091568795987Novosphingobium aromaticivorans DSM 12444, complete genometype II secretion system protein8e-23107
NC_011027:1570955:160219716021971603165969Chlorobaculum parvum NCIB 8327, complete genometype II secretion system protein4e-21102
NC_002932:440191:455327455327456244918Chlorobium tepidum TLS, complete genomeTadB protein2e-1997.1
NC_013223:1349000:136491413649141365885972Desulfohalobium retbaense DSM 5692, complete genomeType II secretion system F domain protein3e-1892.8
NC_007498:2046935:205091920509192051896978Pelobacter carbinolicus DSM 2380, complete genomeFlp pilus assembly protein TadB4e-1789
NC_008541:3282415:329572832957283296678951Arthrobacter sp. FB24 chromosome 1, complete sequencetype II secretion system protein1e-1687.4
NC_008609:2933468:293953529395352940500966Pelobacter propionicus DSM 2379, complete genometype II secretion system protein2e-1686.7
NC_011894:3885490:390713739071373908120984Methylobacterium nodulans ORS 2060, complete genometype II secretion system protein4e-1685.9
NC_021171:4549673:456131845613184562301984Bacillus sp. 1NLA3E, complete genometype II secretion system F domain-containing protein8e-1684.7
NC_008541:3282415:330340633034063304338933Arthrobacter sp. FB24 chromosome 1, complete sequencetype II secretion system protein2e-1583.6
NC_010338:4530403:455321545532154554192978Caulobacter sp. K31, complete genometype II secretion system protein8e-1581.3
NC_018867:361423:380079380079381026948Dehalobacter sp. CF chromosome, complete genomeFlp pilus assembly protein TadB2e-1480.1
NC_011886:2950411:297252029725202973470951Arthrobacter chlorophenolicus A6, complete genometype II secretion system protein3e-1479.3
NC_011894:2618951:265750026575002658444945Methylobacterium nodulans ORS 2060, complete genometype II secretion system protein1e-1377
NC_014830:532122:5450575450575470151959Intrasporangium calvum DSM 43043 chromosome, complete genomeType II secretion system F domain5e-1375.5
NC_015757:2844599:285604128560412856970930Sulfobacillus acidophilus TPY chromosome, complete genomeType II secretion system F domain protein6e-1375.1
NC_016884:813000:821307821307822224918Sulfobacillus acidophilus DSM 10332 chromosome, complete genometype II secretion system F domain-containing protein6e-1375.1
NC_008786:266959:271026271026271898873Verminephrobacter eiseniae EF01-2, complete genometype II secretion system protein7e-1375.1
NC_008536:5259438:527572152757215276686966Solibacter usitatus Ellin6076, complete genometype II secretion system protein7e-1271.6
NC_015588:95697:108643108643109572930Isoptericola variabilis 225 chromosome, complete genomeType II secretion system F domain protein6e-1168.6
NC_011886:2950411:297992329799232980855933Arthrobacter chlorophenolicus A6, complete genometype II secretion system protein3e-1066.2
NC_004463:3857763:3865865386586538668811017Bradyrhizobium japonicum USDA 110, complete genomehypothetical protein2e-0963.5
NC_014152:397177:400594400594401553960Thermincola sp. JR, complete genomeType II secretion system F domain protein2e-0860.1
NC_015224:3820338:384611838461183846789672Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,type II secretion system protein F domain protein2e-0653.5
NC_007333:2674596:267993426799342680866933Thermobifida fusca YX, complete genomeputative integral membrane protein3e-0653.1
NC_010465:733916:742221742221743096876Yersinia pseudotuberculosis YPIII, complete genometype II secretion system protein6e-0652
NC_021171:4549673:456038545603854561314930Bacillus sp. 1NLA3E, complete genometype II secretion system protein6e-0652
NC_010718:2460893:246133624613362462289954Natranaerobius thermophilus JW/NM-WN-LF, complete genometype II secretion system protein6e-0652
NC_013385:759420:781240781240782097858Ammonifex degensii KC4, complete genomeFlp pilus assembly protein TadB-like protein9e-0651.2