Pre_GI: BLASTP Hits

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Query: NC_010334:2749250:2752746 Shewanella halifaxensis HAW-EB4, complete genome

Start: 2752746, End: 2753867, Length: 1122

Host Lineage: Shewanella halifaxensis; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from sediment in a munitions-dumping area of the Emerald Basin (depth of 215 m, Atlantic Ocean), offshore of Halifax Harbour (Nova Scotia, Canada). It is capable of efficiently degrading RDX (hexahydro-1,3,5-trinitro-1,3,5-triazine), an explosive compound that contaminates the environment. This bacterium is an obligate respiratory organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009901:2427291:2450325245032524514431119Shewanella pealeana ATCC 700345, complete genomehydrogenase expression/formation protein HypD0711
NC_009092:1989977:2007954200795420090691116Shewanella loihica PV-4, complete genomehydrogenase expression/formation protein HypD4e-178624
NC_017192:1841987:1853660185366018547871128Arcobacter sp. L, complete genomehydrogenase expression/formation protein HypD7e-127453
NC_007575:1484305:1493160149316014943021143Sulfurimonas denitrificans DSM 1251, complete genomehydrogenase formation HypD protein7e-124444
NC_003272:784437:8032858032858044361152Nostoc sp. PCC 7120, complete genomehydrogenase expression/formation protein6e-116417
NC_007413:5742406:5759737575973757608881152Anabaena variabilis ATCC 29413, complete genomeHydrogenase formation HypD protein1e-114413
NC_007626:1746475:1778045177804517791841140Magnetospirillum magneticum AMB-1, complete genomeHydrogenase expression/formation protein hypD21e-105383
NC_017273:352150:3731133731133742371125Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, completehydrogenase expression/formation protein HypD2e-105382
NC_010336:852915:8643368643368654271092Francisella philomiragia subsp. philomiragia ATCC 25017, completehydrogenase expression/formation protein HypD4e-104378
NC_009937:673820:6765636765636776841122Azorhizobium caulinodans ORS 571, complete genomehydrogenase formation protein4e-104378
NC_008340:2272692:2288590228859022897261137Alkalilimnicola ehrlichei MLHE-1, complete genomehydrogenase expression/formation protein HypD6e-101367
NC_004463:1898648:1900381190038119015321152Bradyrhizobium japonicum USDA 110, complete genomehydrogenase expression/formation protein2e-99362
NC_011666:3001513:3018769301876930199141146Methylocella silvestris BL2, complete genomehydrogenase expression/formation protein HypD2e-97355
NC_010067:84093:1110881110881122091122Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein3e-97355
NC_010794:1673049:1673049167304916741551107Methylacidiphilum infernorum V4, complete genome[NiFe] hydrogenase metallocenter assembly protein HypD4e-97355
NC_015587:28997:4483844838459321095Hydrogenobaculum sp. SHO chromosome, complete genomehydrogenase expression/formation protein HypD1e-96353
NC_020411:28995:4483644836459301095Hydrogenobaculum sp. HO, complete genomeHydrogenase maturation protein HypD1e-96353
NC_015557:30622:4480244802458961095Hydrogenobaculum sp. 3684 chromosome, complete genomehydrogenase expression/formation protein HypD1e-96353
NC_008253:2828573:2829708282970828308291122Escherichia coli 536, complete genomehydrogenase isoenzymes formation protein HYpd1e-94347
NC_009801:3013838:3015327301532730164481122Escherichia coli E24377A, complete genomehydrogenase expression/formation protein HypD2e-94346
NC_013222:229190:2449472449472460471101Robiginitalea biformata HTCC2501, complete genomeputative [NiFe] hydrogenase expression/formation protein6e-94344
NC_010278:1467146:1471962147196214730771116Actinobacillus pleuropneumoniae serovar 3 str. JL03 chromosome,hydrogenase maturation factor1e-92340
NC_012483:3529895:3540046354004635411731128Acidobacterium capsulatum ATCC 51196, complete genomehydrogenase expression/formation protein HypD1e-91337
NC_013730:4636575:4653776465377646548731098Spirosoma linguale DSM 74, complete genomehydrogenase expression/formation protein HypD3e-88325
NC_021182:1983456:2000868200086820019501083Clostridium pasteurianum BC1, complete genomehydrogenase expression/formation protein HypD2e-86319
NC_015555:114977:1252101252101262621053Thermoanaerobacterium xylanolyticum LX-11 chromosome, completehydrogenase expression/formation protein HypD2e-82305
NC_011898:513835:5328455328455339301086Clostridium cellulolyticum H10, complete genomehydrogenase expression/formation protein HypD3e-82305
NC_015499:1097432:1103515110351511045941080Thermodesulfobium narugense DSM 14796 chromosome, complete genomehydrogenase expression/formation protein HypD8e-81300
NC_013921:1614397:1619460161946016205181059Thermoanaerobacter italicus Ab9 chromosome, complete genomehydrogenase expression/formation protein HypD1e-80300
NC_015958:141500:1501151501151511761062Thermoanaerobacter wiegelii Rt8.B1 chromosome, complete genomehydrogenase expression/formation protein HypD7e-80297
NC_015565:348941:3700743700743711951122Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completehydrogenase expression/formation protein HypD2e-79296
NC_014209:1580423:1585434158543415864921059Thermoanaerobacter mathranii subsp. mathranii str. A3 chromosome,hydrogenase expression/formation protein HypD2e-78292
NC_009635:905768:9207429207429218631122Methanococcus aeolicus Nankai-3 chromosome, complete genomehydrogenase expression/formation protein HypD4e-77288
NC_014408:1340016:1340016134001613410711056Methanothermobacter marburgensis str. Marburg chromosome, completehydrogenase expression/formation protein HypD5e-76285
NC_015216:2276929:2293935229393522949931059Methanobacterium sp. AL-21 chromosome, complete genomehydrogenase expression/formation protein HypD5e-74278
NC_019942:987134:1048364104836410494611098Aciduliprofundum sp. MAR08-339, complete genomehydrogenase expression/formation protein HypD4e-73275
NC_014328:2518081:2529858252985825309161059Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative hydrogenase expression/formation protein HypD1e-72273
NC_014926:875948:8821958821958832561062Thermovibrio ammonificans HB-1 chromosome, complete genomehydrogenase expression/formation protein HypD1e-69264
NC_011832:1949717:1965167196516719661921026Candidatus Methanosphaerula palustris E1-9c, complete genomehydrogenase expression/formation protein HypD1e-68260
NC_016627:1133759:1146360114636011474091050Clostridium clariflavum DSM 19732 chromosome, complete genomehydrogenase expression/formation protein HypD5e-67254
NC_009051:1118486:1121028112102811220591032Methanoculleus marisnigri JR1, complete genomehydrogenase expression/formation protein HypD8e-67254
NC_010001:2125500:2140465214046521415111047Clostridium phytofermentans ISDg, complete genomehydrogenase formation HypD protein2e-64246
NC_014507:1373325:1373325137332513743531029Methanoplanus petrolearius DSM 11571 chromosome, complete genomehydrogenase expression/formation protein HypD3e-64245
NC_008698:1556223:1559975155997515612101236Thermofilum pendens Hrk 5, complete genomehydrogenase formation HypD protein5e-57221
NC_016070:167362:1813101813101825961287Thermoproteus tenax Kra 1, complete genomehydrogenase expression/formation protein2e-51203
NC_008576:1061171:1076962107696210780621101Magnetococcus sp. MC-1, complete genomehydrogenase formation HypD protein6e-48191
NC_017273:352150:383916383916384144229Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete6e-1168.9