Pre_GI: BLASTP Hits

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Query: NC_010322:6037566:6067932 Pseudomonas putida GB-1 chromosome, complete genome

Start: 6067932, End: 6068402, Length: 471

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas putida strain GB-1, a fresh water, Gram-negative gamma-proteobacterium, is a genetically tractable, robust manganese (Mn) oxidizer, and as such, is an ideal model for unraveling the catalytic mechanism for, and the molecular regulation of Mn(IV) oxide production and its eventual accumulation on the cell surface at the onset of stationary phase. Since its isolation from Green Bay nearly 20 years ago by Ken Nealson’s group (then at the Center for Great Lakes Studies, Univ. Wisconsin-Milwaukee, USA), it has been the non spore-forming, model organism (along with the closely-related strain MnB1) for molecular genetic studies of Mn(II) oxidization, protein transport and biofilm formation and for biochemical studies on protein purification and Mn(III)-pyoverdine binding. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010501:5735656:576308357630835763553471Pseudomonas putida W619, complete genomeATP synthase F0, B subunit2e-74277
NC_015733:5955467:598256559825655983035471Pseudomonas putida S16 chromosome, complete genomeF0F1 ATP synthase subunit B2e-74277
NC_009512:5920960:594858259485825949052471Pseudomonas putida F1, complete genomeATP synthase F0, B subunit7e-74275
NC_017986:2687588:271749627174962717966471Pseudomonas putida ND6 chromosome, complete genomeF0F1 ATP synthase subunit B2e-73273
NC_002947:6152500:617963861796386180108471Pseudomonas putida KT2440, complete genomeATP synthase subunit B2e-73273
NC_007005:6056765:608201560820156082485471Pseudomonas syringae pv. syringae B728a, complete genomeATP synthase subunit B5e-65246
NC_007492:6372900:642732164273216427791471Pseudomonas fluorescens PfO-1, complete genomeATP synthase F0, subunit B4e-64243
NC_005966:159232:180289180289180759471Acinetobacter sp. ADP1, complete genomemembrane-bound ATP synthase, F0 sector, subunit b1e-39161
NC_004337:3590323:392768639276863928156471Shigella flexneri 2a str. 301, complete genomeATP synthase subunit B8e-37152
NC_014733:2851984:285198428519842852454471Methylovorus sp. MP688 chromosome, complete genomeATP synthase f0, b subunit2e-33140
NC_015222:386000:392723392723393196474Nitrosomonas sp. AL212 chromosome, complete genomeATP synthase F0, B subunit2e-32137
NC_004757:230541:237090237090237563474Nitrosomonas europaea ATCC 19718, complete genomeATP synthase B/B' CF(0)5e-31133
NC_016632:1:112111211591471Serratia symbiotica str. 'Cinara cedri' chromosome, completeATP synthase subunit B1e-30131
NC_015572:4916430:494801649480164948489474Methylomonas methanica MC09 chromosome, complete genomeATP synthase subunit b4e-29126
NC_007520:2391675:239167523916752392145471Thiomicrospira crunogena XCL-2, complete genomeATP synthase F0, B subunit2e-28124
NC_015696:517941:554840554840555310471Francisella sp. TX077308 chromosome, complete genomeATP synthase subunit B6e-28123
NC_010336:996661:103339110333911033861471Francisella philomiragia subsp. philomiragia ATCC 25017, completeATP synthase, F0 sector, subunit B6e-28122
NC_009257:109528:146205146205146675471Francisella tularensis subsp. tularensis WY96-3418 chromosome,F0F1 ATP synthase subunit B4e-23107
NC_006570:24636:613046130461774471Francisella tularensis subsp. tularensis Schu 4, complete genomeATP synthase B chain3e-23107
NC_010677:96470:133153133153133623471Francisella tularensis subsp. mediasiatica FSC147, complete genomeATP synthase, F0 sector, subunit b3e-23107
NC_008601:1733940:176455817645581765028471Francisella tularensis subsp. novicida U112, complete genomeATP synthase, F0 sector, subunit b3e-23107
NC_008245:24652:613206132061790471Francisella tularensis subsp. tularensis FSC 198, complete genomeATP synthase B chain3e-23107
NC_016933:24654:613226132261792471Francisella tularensis TIGB03 chromosome, complete genomeATP synthase subunit B3e-23107
NC_016937:24654:613226132261792471Francisella tularensis subsp. tularensis TI0902 chromosome,ATP synthase subunit B3e-23107
NC_007292:1:375337534247495Candidatus Blochmannia pennsylvanicus str. BPEN, complete genomeATP synthase, F0 sector, subunit b5e-23106
NC_007880:1703346:173305917330591733529471Francisella tularensis subsp. holarctica, complete genomeATP synthase B chain5e-23106
NC_009749:1699152:172895617289561729426471Francisella tularensis subsp. holarctica FTA, complete genomeATP synthase F0, B subunit5e-23106
NC_008369:1702885:173268917326891733159471Francisella tularensis subsp. holarctica OSU18, complete genomeH(+)-transporting two-sector ATPase5e-23106
NC_010513:542312:544440544440544973534Xylella fastidiosa M12 chromosome, complete genomeF0F1 ATP synthase subunit B2e-21101
NC_002488:1099975:110586611058661106336471Xylella fastidiosa 9a5c, complete genomeATP synthase subunit B4e-21100
NC_004344:1:332833283813486Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis,hypothetical protein1e-1891.7
NC_004556:531000:533192533192533662471Xylella fastidiosa Temecula1, complete genomeATP synthase subunit B6e-1889.7
NC_010577:530917:533045533045533515471Xylella fastidiosa M23, complete genomeATP synthase F0, B subunit6e-1889.7
NC_019815:679592:684834684834685274441Candidatus Kinetoplastibacterium crithidii (ex Angomonas deaneiF0F1 ATP synthase subunit B3e-1787.4
NC_020291:684500:687863687863688342480Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeATP synthase subunit b6e-1063.2
NC_019903:3537545:354053235405323541026495Desulfitobacterium dichloroeliminans LMG P-21439 chromosome,ATP synthase F0 subcomplex subunit B6e-1063.2
NC_017216:1682219:168221916822191682746528Bifidobacterium animalis subsp. lactis BLC1, complete genomeF0F1 ATP synthase subunit B2e-0961.6
NC_017215:1687161:168716116871611687688528Bifidobacterium animalis subsp. lactis CNCM I-2494 chromosome,H(+)-transporting two-sector ATPase2e-0961.6
NC_017214:379728:379728379728380255528Bifidobacterium animalis subsp. lactis BB-12 chromosome, completeATP synthase subunit B2e-0961.6
NC_011835:813345:813345813345813872528Bifidobacterium animalis subsp. lactis AD011 chromosome, completeATP synthase subunit B2e-0961.6
NC_012814:1682500:168257416825741683101528Bifidobacterium animalis subsp. lactis Bl-04, complete genomeF0F1 ATP synthase subunit B2e-0961.6
NC_016510:1874942:188951518895151890015501Flavobacterium columnare ATCC 49512 chromosome, complete genomeF0F1 ATP synthase subunit B8e-0856.2
NC_014654:454633:458729458729459229501Halanaerobium sp. 'sapolanicus' chromosome, complete genomeATP synthase F0, B subunit3e-0754.3
NC_011772:5158680:518295451829545183460507Bacillus cereus G9842, complete genomeATP synthase F0, B subunit3e-0754.3
NC_008618:1804610:180716718071671807688522Bifidobacterium adolescentis ATCC 15703, complete genomeprotein with similarity to ATP synthase B chain3e-0754.3
NC_013853:1295000:131402013140201314514495Streptococcus mitis B6, complete genomeproton-translocating ATPase, F0 sector, subunit b3e-0754.3
NC_017219:333279:355591355591356109519Bifidobacterium longum subsp. infantis ATCC 15697, complete genomeATP synthase subunit B4e-0753.9
NC_011593:333488:355800355800356318519Bifidobacterium longum subsp. infantis ATCC 15697 chromosome,F0F1 ATP synthase subunit B4e-0753.9
NC_013714:2203854:222178922217892222310522Bifidobacterium dentium Bd1, complete genomeATP synthase B chain5e-0753.5
NC_003909:4996783:502128050212805021786507Bacillus cereus ATCC 10987, complete genomeATP synthase subunit B7e-0753.1
NC_004722:5194000:522101352210135221519507Bacillus cereus ATCC 14579, complete genomeATP synthase subunit B7e-0753.1
NC_011725:5201995:522899152289915229497507Bacillus cereus B4264 chromosome, complete genomeATP synthase F0F1 subunit B7e-0753.1
NC_011969:4993386:502052150205215021027507Bacillus cereus Q1 chromosome, complete genomeF0F1 ATP synthase subunit b7e-0753.1
NC_003997:5032969:504259050425905043096507Bacillus anthracis str. Ames, complete genomeATP synthase subunit B8e-0752.8
NC_008600:5046000:507143550714355071941507Bacillus thuringiensis str. Al Hakam, complete genomeATP synthase F0, subunit B8e-0752.8
NC_005957:5037499:504741450474145047920507Bacillus thuringiensis serovar konkukian str. 97-27, completeATP synthase subunit B8e-0752.8
NC_007530:5033095:504271650427165043222507Bacillus anthracis str. 'Ames Ancestor', complete genomeATP synthase subunit B8e-0752.8
NC_011773:5091609:510239851023985102904507Bacillus cereus AH820 chromosome, complete genomeF0F1 ATP synthase subunit B8e-0752.8
NC_012659:5031827:504261650426165043122507Bacillus anthracis str. A0248, complete genomeF0F1 ATP synthase subunit B8e-0752.8
NC_016779:5009320:503607950360795036585507Bacillus cereus F837/76 chromosome, complete genomeATP synthase subunit B8e-0752.8
NC_017080:191906:214771214771215388618Phycisphaera mikurensis NBRC 102666, complete genomeATP synthase subunit b1e-0652
NC_009922:2766397:276692727669272767430504Alkaliphilus oremlandii OhILAs, complete genomeATP synthase F0, B subunit2e-0651.6
NC_008528:610070:624742624742625272531Oenococcus oeni PSU-1, complete genomeF0F1-type ATP synthase, subunit b3e-0650.8
NC_004193:3078730:308983430898343090361528Oceanobacillus iheyensis HTE831, complete genomeH(+)-transporting ATP synthase B chain3e-0650.8
NC_017200:5149528:516044751604475160953507Bacillus thuringiensis serovar finitimus YBT-020 chromosome,F0F1 ATP synthase subunit B5e-0650.4
NC_009617:489971:502391502391502870480Clostridium beijerinckii NCIMB 8052 chromosome, complete genomeF0F1 ATP synthase subunit B6e-0650.1
NC_018720:1878201:188322918832291883774546Bifidobacterium asteroides PRL2011 chromosome, complete genomeATP synthase F0, B subunit7e-0649.7
NC_021171:4588792:464177946417794642312534Bacillus sp. 1NLA3E, complete genomeF0F1 ATP synthase subunit B8e-0649.7