Pre_GI: BLASTP Hits

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Query: NC_010322:583842:594321 Pseudomonas putida GB-1 chromosome, complete genome

Start: 594321, End: 594785, Length: 465

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas putida strain GB-1, a fresh water, Gram-negative gamma-proteobacterium, is a genetically tractable, robust manganese (Mn) oxidizer, and as such, is an ideal model for unraveling the catalytic mechanism for, and the molecular regulation of Mn(IV) oxide production and its eventual accumulation on the cell surface at the onset of stationary phase. Since its isolation from Green Bay nearly 20 years ago by Ken Nealson’s group (then at the Center for Great Lakes Studies, Univ. Wisconsin-Milwaukee, USA), it has been the non spore-forming, model organism (along with the closely-related strain MnB1) for molecular genetic studies of Mn(II) oxidization, protein transport and biofilm formation and for biochemical studies on protein purification and Mn(III)-pyoverdine binding. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015726:406450:418952418952419422471Cupriavidus necator N-1 chromosome 1, complete sequencehypothetical protein5e-40163
NC_020829:636773:646604646604647044441Pseudomonas denitrificans ATCC 13867, complete genomehypothetical protein3e-33140
NC_015563:2018038:202842220284222028880459Delftia sp. Cs1-4 chromosome, complete genomehypothetical protein3e-22103
NC_014640:6815264:683657368365736837007435Achromobacter xylosoxidans A8 chromosome, complete genomehypothetical protein7e-22102
NC_009524:1369395:137739913773991377815417Psychrobacter sp. PRwf-1 chromosome, complete genomehypothetical protein1e-1995.1
NC_013941:3300000:333160233316023332000399Escherichia coli O55:H7 str. CB9615 chromosome, complete genomehypothetical protein2e-1787.8
NC_002695:3468873:349387034938703494268399Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein2e-1787.8
NC_013421:1819036:185362218536221854020399Pectobacterium wasabiae WPP163, complete genomehypothetical protein9e-1682.4
NC_011283:4438500:445920544592054459609405Klebsiella pneumoniae 342 chromosome, complete genomehypothetical protein3e-1477.8
NC_014752:834616:847842847842848252411Neisseria lactamica ST-640, complete genomehypothetical protein1e-1375.5
NC_010067:191190:204775204775205179405Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein1e-1375.5
NC_009436:3117661:314076231407623141148387Enterobacter sp. 638, complete genomehypothetical protein2e-1374.7
NC_004547:1174650:119183911918391192258420Erwinia carotovora subsp. atroseptica SCRI1043, complete genomehypothetical protein2e-1374.3
NC_011741:4570498:458573545857354586121387Escherichia coli IAI1 chromosome, complete genomehypothetical protein4e-1373.6
CU928160:4570498:458573545857354586121387Escherichia coli IAI1 chromosome, complete genomeconserved hypothetical protein4e-1373.6
NC_008800:1090000:110376511037651104169405Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,hypothetical protein5e-1373.6
NC_009665:639914:647204647204647731528Shewanella baltica OS185 chromosome, complete genomehypothetical protein8e-1166.2
NC_011663:674069:681365681365681892528Shewanella baltica OS223 chromosome, complete genomehypothetical protein8e-1166.2
NC_012880:3421500:343493134349313435314384Dickeya dadantii Ech703, complete genomehypothetical protein2e-0962
NC_012917:1840172:185489918548991855315417Pectobacterium carotovorum subsp. carotovorum PC1, complete genomehypothetical protein2e-0961.6
NC_003919:3396136:340610134061013406553453Xanthomonas axonopodis pv. citri str. 306, complete genomehypothetical protein5e-0960.1
NC_013008:3525428:355283135528313553052222Escherichia coli O157:H7 str. TW14359 chromosome, complete genomehypothetical protein5e-0960.1
NC_011353:3573641:359810635981063598327222Escherichia coli O157:H7 str. EC4115 chromosome, complete genomehypothetical protein5e-0960.1
NC_002655:3538656:356115435611543561375222Escherichia coli O157:H7 EDL933, complete genomehypothetical protein5e-0960.1
NC_014394:2577949:259302525930252593450426Gallionella capsiferriformans ES-2 chromosome, complete genomehypothetical protein8e-0959.3
NC_009792:3665369:368553836855383685936399Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein8e-0959.3
NC_010506:4873487:488593848859384886345408Shewanella woodyi ATCC 51908, complete genomehypothetical protein1e-0858.9
NC_016816:1545354:155497415549741555378405Pantoea ananatis LMG 5342, complete genomehypothetical protein1e-0858.5
NC_008577:2604281:261281926128192613241423Shewanella sp. ANA-3 chromosome 1, complete sequencehypothetical protein3e-0857.8
NC_020829:940692:987323987323987727405Pseudomonas denitrificans ATCC 13867, complete genomehypothetical protein7e-0856.2
NC_005773:4899252:490673649067364907134399Pseudomonas syringae pv. phaseolicola 1448A, complete genomehypothetical protein7e-0753.1
NC_004578:5192110:520069552006955201093399Pseudomonas syringae pv. tomato str. DC3000, complete genomehypothetical protein1e-0652