Pre_GI: BLASTP Hits

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Query: NC_010322:3084834:3096203 Pseudomonas putida GB-1 chromosome, complete genome

Start: 3096203, End: 3097318, Length: 1116

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas putida strain GB-1, a fresh water, Gram-negative gamma-proteobacterium, is a genetically tractable, robust manganese (Mn) oxidizer, and as such, is an ideal model for unraveling the catalytic mechanism for, and the molecular regulation of Mn(IV) oxide production and its eventual accumulation on the cell surface at the onset of stationary phase. Since its isolation from Green Bay nearly 20 years ago by Ken Nealson’s group (then at the Center for Great Lakes Studies, Univ. Wisconsin-Milwaukee, USA), it has been the non spore-forming, model organism (along with the closely-related strain MnB1) for molecular genetic studies of Mn(II) oxidization, protein transport and biofilm formation and for biochemical studies on protein purification and Mn(III)-pyoverdine binding. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007005:5882205:5903248590324859042581011Pseudomonas syringae pv. syringae B728a, complete genomeADP-ribosylglycohydrolase1e-126452
NC_009832:3313058:3322516332251633236161101Serratia proteamaculans 568, complete genomeADP-ribosyl-(dinitrogen reductase) hydrolase2e-111402
NC_002947:3492379:349899834989983499780783Pseudomonas putida KT2440, complete genomeADP-ribosylglycohydrolase family protein5e-106384
NC_016514:2713834:2759000275900027601001101Enterobacter cloacae EcWSU1 chromosome, complete genomeADP-ribosyl-[dinitrogen reductase] glycohydrolase9e-106383
NC_005773:5734733:574248757424875743314828Pseudomonas syringae pv. phaseolicola 1448A, complete genomeADP-ribosylglycohydrolase family protein1e-101370
NC_013961:3083816:3088032308803230891261095Erwinia amylovora, complete genomeputative ADP-ribosyl-[dinitrogen reductase] hydrolase1e-94346
NC_013971:666730:6822566822566833501095Erwinia amylovora ATCC 49946 chromosome, complete genomeribosylglycohydrolase1e-94346
NC_010694:715500:7318107318107329041095Erwinia tasmaniensis, complete genomeADP-ribosylglycohydrolase1e-93343
NC_012214:745302:7603117603117614051095Erwinia pyrifoliae Ep1/96, complete genomeADP-ribosylglycohydrolase5e-92338
NC_016147:3349272:336029433602943361235942Pseudoxanthomonas spadix BD-a59 chromosome, complete genomeADP-ribosylation/crystallin J14e-58225
NC_010172:5447189:5463619546361954651451527Methylobacterium extorquens PA1, complete genomeADP-ribosylation/Crystallin J13e-56219
NC_007794:262402:2724772724772739491473Novosphingobium aromaticivorans DSM 12444, complete genomeADP-ribosyl-(dinitrogen reductase) hydrolase8e-56218
NC_012988:1777618:1792042179204217936161575Methylobacterium extorquens DM4, complete genomeADP-ribosyl glycohydrolase4e-54212
NC_015681:102000:103876103876104793918Thermodesulfatator indicus DSM 15286 chromosome, complete genomeADP-ribosylation/Crystallin J13e-54212
NC_007604:1586243:161880016188001619696897Synechococcus elongatus PCC 7942, complete genomeADP-ribosylglycohydrolase-like3e-41169
NC_015676:1663700:166276616627661663743978Methanosalsum zhilinae DSM 4017 chromosome, complete genomeADP-ribosylation/Crystallin J17e-39161
NC_015573:2323268:233986423398642340820957Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomeADP-ribosyl-(dinitrogen reductase) hydrolase6e-31135
NC_021175:2037219:204642820464282047414987Streptococcus oligofermentans AS 1.3089, complete genomeADP-ribosylglycohydrolase2e-28126
NC_007426:1840670:188086318808631881780918Natronomonas pharaonis DSM 2160, complete genomeprobable ADP-ribosylglycohydrolase3e-27123
NC_014410:482193:497506497506498381876Thermoanaerobacterium thermosaccharolyticum DSM 571 chromosome,ADP-ribosyl-(dinitrogen reductase) hydrolase2e-27123
NC_014376:2964731:2995726299572629970751350Clostridium saccharolyticum WM1 chromosome, complete genomeADP-ribosylation/Crystallin J17e-27121
NC_017295:389500:3989303989303999551026Clostridium acetobutylicum EA 2018 chromosome, complete genomeADP-ribosylglycohydrolase6e-26118
NC_015687:389500:3989363989363999611026Clostridium acetobutylicum DSM 1731 chromosome, complete genomeADP-ribosylglycohydrolase6e-26118
NC_003030:389500:3989403989403999651026Clostridium acetobutylicum ATCC 824, complete genomeADP-ribosylglycohydrolase6e-26118
NC_013517:4208939:4263205426320542643651161Sebaldella termitidis ATCC 33386, complete genomeADP-ribosylation/Crystallin J17e-25115
NC_014019:2711500:273508427350842736013930Bacillus megaterium QM B1551 chromosome, complete genomeADP-ribosylglycohydrolase4e-24112
NC_013205:19295:320613206132999939Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,ADP-ribosylation/Crystallin J12e-22107
NC_015067:998500:100325610032561004077822Bifidobacterium longum subsp. longum JCM 1217, complete genomeribosylglycohydrolase4e-22105
NC_015680:1315040:133340213334021334337936Pyrococcus yayanosii CH1 chromosome, complete genomeputative ribosylglycohydrolase4e-22105
NC_010475:420978:422514422514423464951Synechococcus sp. PCC 7002, complete genomeADP-ribosylglycohydrolase6e-22105
NC_006576:12230:197701977020447678Synechococcus elongatus PCC 6301, complete genomehypothetical protein3e-21103
NC_014731:296000:3193903193903207181329Halogeometricum borinquense DSM 11551 plasmid pHBOR02, completeADP-ribosylglycohydrolase1e-1997.4
NC_013406:4023367:404397040439704044851882Paenibacillus sp. Y412MC10 chromosome, complete genomeADP-ribosyl-(dinitrogen reductase) hydrolase4e-1996.3
NC_015520:224136:2393612393612408211461Mahella australiensis 50-1 BON chromosome, complete genomeADP-ribosylation/Crystallin J11e-1894.4
NC_014729:1248782:124950612495061250414909Halogeometricum borinquense DSM 11551 chromosome, complete genomeADP-ribosylglycohydrolase2e-1790.5
NC_012808:1122341:114104411410441141508465Methylobacterium extorquens AM1, complete genomeADP-ribosyl glycohydrolase family protein (fragment)5e-1789
NC_018012:2327376:233026123302612331202942Thiocystis violascens DSM 198 chromosome, complete genomeADP-ribosyl-(dinitrogen reductase) hydrolase1e-1687.8
NC_019792:2524130:258353025835302584438909Natronobacterium gregoryi SP2 chromosome, complete genomeADP-ribosylglycohydrolase5e-1685.5
NC_017221:1222963:123925712392571239967711Bifidobacterium longum subsp. longum KACC 91563 chromosome,ribosylglycohydrolase1e-1480.9
NC_017955:4075804:4091072409107240924661395Modestobacter marinus, complete genomeADP-ribosyl glycohydrolase family protein7e-1478.6
NC_013156:226215:228122228122229030909Methanocaldococcus fervens AG86, complete genomeADP-ribosylation/Crystallin J14e-1375.9
NC_008726:1142500:1169171116917111706221452Mycobacterium vanbaalenii PYR-1, complete genomeADP-ribosylation/Crystallin J11e-1274.7
NC_008146:861319:9202279202279223232097Mycobacterium sp. MCS, complete genomeADP-ribosylation/Crystallin J14e-1169.3
NC_008705:868623:9289569289569310522097Mycobacterium sp. KMS, complete genomeADP-ribosylation/Crystallin J14e-1169.3
NC_013173:815696:840898840898841719822Desulfomicrobium baculatum DSM 4028, complete genomeADP-ribosylation/Crystallin J14e-1169.3
NC_013887:812091:816065816065816970906Methanocaldococcus sp. FS406-22 chromosome, complete genomeADP-ribosylation/Crystallin J11e-1067.8
NC_000909:1123161:112712111271211128026906Methanocaldococcus jannaschii DSM 2661, complete genomedinitrogenase reductase activating glycohydrolase (draG)5e-1065.9
NC_012489:209016:2281522281522292311080Gemmatimonas aurantiaca T-27, complete genomeputative hydrolase4e-1065.9
NC_007512:944941:944941944941945936996Pelodictyon luteolum DSM 273, complete genomeputative ribosylglycohydrolase4e-0962.8
NC_009337:89631:108298108298109245948Chlorobium phaeovibrioides DSM 265 chromosome, complete genomeADP-ribosylation/crystallin J11e-0861.2
NC_003888:56225:721597215973097939Streptomyces coelicolor A3(2), complete genomeribosylglycohydrolase (secreted protein)1e-0757.8
NC_018581:2768743:2824613282461328259681356Gordonia sp. KTR9 chromosome, complete genomehydrolase8e-0755.1