Pre_GI: BLASTP Hits

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Query: NC_010322:29983:48956 Pseudomonas putida GB-1 chromosome, complete genome

Start: 48956, End: 50410, Length: 1455

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas putida strain GB-1, a fresh water, Gram-negative gamma-proteobacterium, is a genetically tractable, robust manganese (Mn) oxidizer, and as such, is an ideal model for unraveling the catalytic mechanism for, and the molecular regulation of Mn(IV) oxide production and its eventual accumulation on the cell surface at the onset of stationary phase. Since its isolation from Green Bay nearly 20 years ago by Ken Nealson’s group (then at the Center for Great Lakes Studies, Univ. Wisconsin-Milwaukee, USA), it has been the non spore-forming, model organism (along with the closely-related strain MnB1) for molecular genetic studies of Mn(II) oxidization, protein transport and biofilm formation and for biochemical studies on protein purification and Mn(III)-pyoverdine binding. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_002947:8394:3619836198376521455Pseudomonas putida KT2440, complete genomesugar transferase, putative0783
NC_009512:27783:4817448174496281455Pseudomonas putida F1, complete genomeglycosyl transferase, family 390783
NC_010501:30000:5289052890543441455Pseudomonas putida W619, complete genomeglycosyl transferase family 390783
NC_017986:2548720:2582376258237625838301455Pseudomonas putida ND6 chromosome, complete genomeglycosyl transferase family protein0765
NC_000911:1284552:1304971130497113064431473Synechocystis sp. PCC 6803, complete genomehypothetical protein1e-54214
NC_017039:1283732:1303998130399813054701473Synechocystis sp. PCC 6803 substr. PCC-P, complete genomehypothetical protein1e-54214
NC_017052:1283720:1303986130398613054581473Synechocystis sp. PCC 6803 substr. PCC-N, complete genomehypothetical protein1e-54214
NC_017277:1283477:1303788130378813052601473Synechocystis sp. PCC 6803, complete genomehypothetical protein1e-54214
NC_010170:4800000:4860673486067348621301458Bordetella petrii, complete genomeputative dolichyl-phosphate-mannose-protein mannosyltransferase7e-52205
NC_012559:1228280:1257885125788512593301446Laribacter hongkongensis HLHK9, complete genomeDolichyl-phosphate-mannose-protein mannosyltransferase family protein1e-38160
NC_011146:3426500:3452190345219034538511662Geobacter bemidjiensis Bem, complete genomeglycosyl transferase family 396e-24112
NC_010814:3673983:368495636849563685927972Geobacter lovleyi SZ, complete genomeglycosyl transferase family 396e-2099
NC_014758:1349494:1347917134791713495091593Calditerrivibrio nitroreducens DSM 19672 chromosome, completeglycosyl transferase family 392e-1790.5
NC_015437:27325:2979329793312741482Selenomonas sputigena ATCC 35185 chromosome, complete genomeglycosyl transferase family 392e-1067.4
NC_012438:159927:1629271629271645281602Sulfurihydrogenibium azorense Az-Fu1 chromosome, complete genomedolichyl-phosphate-mannose-protein mannosyltransferase3e-1067
NC_013730:5538323:5559026555902655607801755Spirosoma linguale DSM 74, complete genomeglycosyl transferase family 395e-1066.2
NC_018419:1110000:1121097112109711227491653Secondary endosymbiont of Ctenarytaina eucalypti chromosome,PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase5e-1066.2
NC_015733:5909821:593891659389165939032117Pseudomonas putida S16 chromosome, complete genomeputative sugar transferase1e-0862
NC_015064:3370840:3386719338671933886711953Acidobacterium sp. MP5ACTX9 chromosome, complete genomedolichyl-phosphate-mannose-protein mannosyltransferase family protein2e-0861.2
NC_007298:2947200:2957230295723029588341605Dechloromonas aromatica RCB, complete genomeGlycosyl transferase, family 392e-0861.2
NC_013743:3193355:3204662320466232063951734Haloterrigena turkmenica DSM 5511, complete genomeglycosyl transferase family 393e-0860.5
NC_017047:3085000:3127201312720131288711671Rahnella aquatilis HX2 chromosome, complete genome4-amino-4-deoxy-L-arabinose transferase4e-0860.1
NC_011726:1456585:1477119147711914789871869Cyanothece sp. PCC 8801, complete genomeglycosyl transferase family 394e-0860.1
NC_014248:5196353:5196353519635351981701818Nostoc azollae 0708 chromosome, complete genomefamily 39 glycosyl transferase5e-0859.7
NC_005773:3220500:3251176325117632527771602Pseudomonas syringae pv. phaseolicola 1448A, complete genomedolichyl-phosphate-mannose-protein mannosyltransferase6e-0859.3
NC_007492:857428:8589838589838604161434Pseudomonas fluorescens PfO-1, complete genomeGlycosyl transferase, family 391e-0758.2
NC_013132:705314:7184427184427200011560Chitinophaga pinensis DSM 2588, complete genomeglycosyl transferase family 392e-0758.2
NC_010794:885500:8899468899468916851740Methylacidiphilum infernorum V4, complete genome4-amino-4-deoxy-L-arabinose transferase or related glycosyltransferase of PMT family3e-0653.5
NC_013520:1936209:1945156194515619467871632Veillonella parvula DSM 2008, complete genomeglycosyl transferase family 396e-0652.8