Pre_GI: BLASTP Hits

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Query: NC_010280:769639:789900 Chlamydia trachomatis L2b/UCH-1/proctitis, complete genome

Start: 789900, End: 792827, Length: 2928

Host Lineage: Chlamydia trachomatis; Chlamydia; Chlamydiaceae; Chlamydiales; Chlamydiae; Bacteria

General Information: This strain is a variant of the L2 serovar. Serovar L2 strains are associated with sexually transmitted infections and cause lymphogranuloma vernerum, a systemic infection involving the lymph nodes. Chlamydia trachomatis L2b/UCH-1/proctitis was isolated from a recent outbreak of proctitis in Europe. Causes disease in either the eye or the urogenital tract. Bacteria belonging to the Chlamydiales group are obligate intracellular parasites of eukaryotic cells. They are found within vertebrates, invertebrate cells, and amoebae hosts. Chlamydiae are one of the commonest causes of sexually transmitted diseases (STDs) and if left untreated may cause infertility in women. They are transmitted by direct contact or aerosols, and can cause various diseases, while also being able to coexist with the host in an apparently asymptomatic state. Chlamydia trachomatis causes infection that leads to blindness and sexually transmitted diseases in humans. There are 15 serovariants that preferentially cause disease in either the eye or the urogenital tract. The trachoma (infection of the mucous membrane of the eyelids) biovars are noninvasive and can cause blinding trachoma (variants A, B, Ba, and C), or sexually transmitted diseases (variants, D, E, F, G, H, I, J, and K). The lymphogranuloma venereum biovars (variants L1, L2, and L3) can cross the epithelial cells of mucous membranes and then travel through the lymphatic system where they multiply within mononuclear phagocytes found within the lymph nodes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017439:451535:4717964717964747232928Chlamydia trachomatis E/150 chromosome, complete genomepolymorphic outer membrane protein01969
NC_017431:451551:4718124718124747392928Chlamydia trachomatis E/11023 chromosome, complete genomepolymorphic outer membrane protein01969
NC_015744:769907:7895707895707924972928Chlamydia trachomatis L2c chromosome, complete genomeputative outer membrane protein pmp1001969
NC_010287:769600:7898617898617927882928Chlamydia trachomatis 434/Bu, complete genomepolymorphic outer membrane protein01969
NC_002620:803696:8250688250688280282961Chlamydia muridarum Nigg, complete genomepolymorphic membrane protein A family01562
NC_007899:854768:8547688547688577342967Chlamydophila felis Fe/C-56, complete genomepolymorphic outer membrane protein G/9 family6e-37156
NC_007899:854768:8577608577608607142955Chlamydophila felis Fe/C-56, complete genomepolymorphic outer membrane protein H family3e-31137
NC_017287:710104:7127847127847153272544Chlamydophila psittaci 6BC chromosome, complete genomepolymorphic outer membrane protein2e-29132
NC_003361:282778:2990332990333018252793Chlamydophila caviae GPIC, complete genomepolymorphic outer membrane protein E/F family protein/autotransporter, putative7e-29130
NC_007899:854768:8652848652848681092826Chlamydophila felis Fe/C-56, complete genomepolymorphic outer membrane protein E family3e-28127
NC_004552:269053:2935482935482965142967Chlamydophila abortus S26/3, complete genomepolymorphic outer membrane lipoprotein4e-28127
NC_017287:710104:7101047101047126532550Chlamydophila psittaci 6BC chromosome, complete genomepolymorphic outer membrane protein9e-28126
NC_015470:269296:2939862939862969883003Chlamydophila psittaci 6BC chromosome, complete genomepolymorphic outer membrane protein E family2e-27125
NC_017287:269205:2938952938952968973003Chlamydophila psittaci 6BC chromosome, complete genomeouter membrane protein 52e-27125
NC_020248:268000:2939182939182969233006Chlamydophila psittaci Mat116, complete genomepolymorphic outer membrane lipoprotein3e-27124
NC_003361:282778:2932112932112960212811Chlamydophila caviae GPIC, complete genomepolymorphic outer membrane protein E/F family protein/autotransporter, putative2e-26122
NC_007899:854768:8711718711718740202850Chlamydophila felis Fe/C-56, complete genomepolymorphic outer membrane protein F family9e-25116
NC_003361:282778:2960442960442988692826Chlamydophila caviae GPIC, complete genomepolymorphic outer membrane protein E/F family protein/autotransporter, putative8e-24113
NC_007899:854768:8624718624718644591989Chlamydophila felis Fe/C-56, complete genomepolymorphic outer membrane protein8e-23110
NC_007899:854768:8683038683038711492847Chlamydophila felis Fe/C-56, complete genomepolymorphic outer membrane protein E family6e-21103
NC_003361:282778:3063793063793093242946Chlamydophila caviae GPIC, complete genomepolymorphic outer membrane protein H family protein2e-20102
NC_003361:282778:3018523018523046352784Chlamydophila caviae GPIC, complete genomepolymorphic outer membrane protein E/F family protein/autotransporter, putative9e-1583.2
NC_007899:236715:2402852402852448954611Chlamydophila felis Fe/C-56, complete genomepolymorphic outer membrane protein D2e-1481.6
NC_002620:229856:2298562298562344184563Chlamydia muridarum Nigg, complete genomepolymorphic membrane protein D family3e-1378.2
NC_003361:914459:9261349261349307474614Chlamydophila caviae GPIC, complete genomepolymorphic outer membrane protein D family protein/autotransporter2e-1068.6
NC_013790:2131000:2138899213889921480609162Methanobrevibacter ruminantium M1 chromosome, complete genomeadhesin-like protein3e-0861.6
NC_013790:485468:4854684854684923976930Methanobrevibacter ruminantium M1 chromosome, complete genomeadhesin-like protein3e-0654.7