Pre_GI: BLASTP Hits

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Query: NC_010168:1373337:1379004 Renibacterium salmoninarum ATCC 33209 chromosome, complete genome

Start: 1379004, End: 1380113, Length: 1110

Host Lineage: Renibacterium salmoninarum; Renibacterium; Micrococcaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This bacterial pathogen is the causal agent of bacterial kidney disease (BKD) of salmonid fish. This disease is a significant threat to the healthy and sustainable production of salmon for consumption and species conservation efforts in the USA. The development of treatments are further complicated as the organism is vertically transmitted from infected females to their eggs, is difficult to culture in vitro, and is a facultative intracellular pathogen. The completion of the genome sequence of Renibacterium salmoninarum will be a benefit to the scientific community at many levels and will be of immediate use to researchers and fish health practitioners dealing with BKD in farmed fish as well as captive broodstocks of endangered species-listed populations. For example, genome data will serve as a foundation for identification of virulence factors, DNA vaccine gene candidates, and improved diagnostic tests.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015145:2693749:2715978271597827170691092Arthrobacter phenanthrenivorans Sphe3 chromosome, complete genomedTDP-4-dehydrorhamnose 3,5-epimerase-like enzyme6e-135480
NC_014151:813755:8292318292318303251095Cellulomonas flavigena DSM 20109 chromosome, complete genomeNAD-dependent epimerase/dehydratase6e-91334
NC_014958:3131191:3139989313998931410981110Deinococcus maricopensis DSM 21211 chromosome, complete genomeNAD-dependent epimerase/dehydratase8e-75281
NC_011060:514874:5462265462265473441119Pelodictyon phaeoclathratiforme BU-1, complete genomeNAD-dependent epimerase/dehydratase3e-49196
NC_021171:4519495:4523662452366245247711110Bacillus sp. 1NLA3E, complete genomecapsular polysaccharide synthesis protein Cap5F9e-48191
NC_015732:529201:5693055693055704171113Spirochaeta caldaria DSM 7334 chromosome, complete genomeNAD-dependent epimerase/dehydratase4e-46185
NC_014220:170021:1767801767801778951116Syntrophothermus lipocalidus DSM 12680 chromosome, complete genomeNAD-dependent epimerase/dehydratase7e-45181
NC_015152:272500:2839582839582850671110Spirochaeta sp. Buddy chromosome, complete genomeNAD-dependent epimerase/dehydratase8e-45181
NC_009253:3272000:3291453329145332925621110Desulfotomaculum reducens MI-1 chromosome, complete genomeNAD-dependent epimerase/dehydratase1e-44181
NC_009483:1936486:1964174196417419653641191Geobacter uraniireducens Rf4 chromosome, complete genomeNAD-dependent epimerase/dehydratase3e-44179
NC_017095:119361:1193611193611204701110Fervidobacterium pennivorans DSM 9078 chromosome, complete genomeWxcM-like protein,NAD dependent epimerase/dehydratase family protein6e-44178
NC_012660:1804610:1820398182039818215251128Pseudomonas fluorescens SBW25 chromosome, complete genomeNAD dependent epimerase/dehydratase3e-41169
NC_008027:1559083:1576865157686515779801116Pseudomonas entomophila L48, complete genomenucleoside-diphosphate-sugar epimerase WbjC6e-41168
NC_005363:1604337:1630440163044016315401101Bdellovibrio bacteriovorus HD100, complete genomecapsular polysaccharide synthesis enzyme Cap5F5e-40165
NC_009614:947775:9695659695659707191155Bacteroides vulgatus ATCC 8482 chromosome, complete genomeepimerase/dehydratase, involved in capsular polysaccharide biosynthesis9e-40164
NC_015379:1887275:1908865190886519099831119Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,NAD dependent epimerase/dehydratase4e-39162
NC_013410:3280039:3332277333227733334821206Fibrobacter succinogenes subsp. succinogenes S85 chromosome,NAD-dependent epimerase/dehydratase7e-39161
NC_008782:3167440:3195058319505831962091152Acidovorax sp. JS42, complete genomeNAD-dependent epimerase/dehydratase7e-39161
NC_013361:2848949:2857935285793528590411107Escherichia coli O26:H11 str. 11368 chromosome, complete genomeUDP-2-acetamido-2,6-dideoxy-beta-L-talose 4-dehydrogenase6e-39161
NC_010322:1520973:1536073153607315371911119Pseudomonas putida GB-1 chromosome, complete genomeNAD-dependent epimerase/dehydratase6e-39161
NC_016745:2785346:2792885279288527940031119Oceanimonas sp. GK1 chromosome, complete genomeNAD-dependent epimerase/dehydratase1e-38160
NC_014640:6745873:6764312676431267654181107Achromobacter xylosoxidans A8 chromosome, complete genomeNAD dependent epimerase/dehydratase family protein 61e-38160
NC_014033:103020:1257981257981269941197Prevotella ruminicola 23 chromosome, complete genomehypothetical protein3e-38159
NC_009615:4642500:4667846466784646690541209Parabacteroides distasonis ATCC 8503 chromosome, complete genomecapsular polysaccharide biosynthesis protein Cps4K1e-36154
NC_006513:3486558:3502800350280035039271128Azoarcus sp. EbN1, complete genomeprobable NAD dependent epimerase/dehydratase, possibly involved in polysaccharide biosynthesis1e-36154
NC_011663:1709003:1728016172801617291191104Shewanella baltica OS223 chromosome, complete genomeNAD-dependent epimerase/dehydratase1e-36154
NC_013282:2827757:2838121283812128392241104Cronobacter turicensis, complete genomehypothetical protein1e-36154
NC_015424:3112637:3129941312994131310621122Aeromonas veronii B565 chromosome, complete genomeNAD dependent epimerase/dehydratase6e-36151
NC_014313:165490:1792761792761803611086Hyphomicrobium denitrificans ATCC 51888 chromosome, completeNAD-dependent epimerase/dehydratase5e-35148
NC_009656:1994392:2021096202109620222171122Pseudomonas aeruginosa PA7 chromosome, complete genomeprotein WbjC2e-34146
NC_007644:161222:166469166469166924456Moorella thermoacetica ATCC 39073, complete genomedTDP-4-dehydrorhamnose 3,5-epimerase related2e-0653.9
NC_015320:470988:475353475353475850498Archaeoglobus veneficus SNP6 chromosome, complete genomeCupin 2 barrel domain-containing protein2e-0653.9
NC_009725:3602632:361386036138603614321462Bacillus amyloliquefaciens FZB42, complete genomeSpsL2e-0653.9