Pre_GI: BLASTN Hits

Some Help

Query: NC_010162:7824878 Sorangium cellulosum 'So ce 56', complete genome

Start: 7824878, End: 7851920, Length: 27043

Host Lineage: Sorangium cellulosum; Sorangium; Polyangiaceae; Myxococcales; Proteobacteria; Bacteria

General Information: Sorangium cellulosum 'So ce 56' produces a large number of bioactive compounds, such as, the antifungal soraphen and the anticancer agent epothilone. This organism, like other myxobacteria, undergoes a complex development and differentiation pathway. When cell density increases, the organism switches to "social motility" where aggregates of cells can gather together into masses termed fruiting bodies that may consist of up to 100 000 cells. The motility system is not dependent on flagella like most bacteria, but instead relies on twitching pili: short extracellular appendages that may function analogously to oars in a rowboat. The myxobacteria have proved to be a rich source of novel natural products. Sorangium cellulosum produces a number of antibacterial, antifungal and cytotoxic substances which are being studies for therapeutic applications.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_012724:30703863070386309007619691Burkholderia glumae BGR1 chromosome 1, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_011027:303000*30300033016127162Chlorobaculum parvum NCIB 8327, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_006677:2012841*2012841203080417964Gluconobacter oxydans 621H, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_010524:4644587*4644587468982245236Leptothrix cholodnii SP-6, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_011894:2747491*2747491277359926109Methylobacterium nodulans ORS 2060, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_012660:41494874149487417527325787Pseudomonas fluorescens SBW25 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_010162:85281168528116855329725182Sorangium cellulosum 'So ce 56', complete genome04795BLASTN svgBLASTP svg
NC_010162:9207000*9207000923316826169Sorangium cellulosum 'So ce 56', complete genome04666BLASTN svgBLASTP svg
NC_010162:10764788*107647881078955024763Sorangium cellulosum 'So ce 56', complete genome1e-0869.9BLASTN svgBLASTP svg
NC_010162:12652197126521971267209919903Sorangium cellulosum 'So ce 56', complete genome04666BLASTN svgBLASTP svg
NC_010162:8585856*8585856860409918244Sorangium cellulosum 'So ce 56', complete genome04664BLASTN svgBLASTP svg
NC_010162:87601288760128878109920972Sorangium cellulosum 'So ce 56', complete genome02668BLASTN svgBLASTP svg
NC_010162:95024809502480953339230913Sorangium cellulosum 'So ce 56', complete genome9e-19103BLASTN svgBLASTP svg
NC_010162:93511799351179937441523237Sorangium cellulosum 'So ce 56', complete genome1e-1799.6BLASTN svgBLASTP svg
NC_013947:5431741*5431741545589424154Stackebrandtia nassauensis DSM 44728 chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_006177:23693612369361239379224432Symbiobacterium thermophilum IAM 14863, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_007404:1964935*1964935200068635752Thiobacillus denitrificans ATCC 25259, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_019940:17273841727384175409926716Thioflavicoccus mobilis 8321 chromosome, complete genome1e-1179.8BLASTN svgBLASTP svg