Pre_GI: BLASTN Hits

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Query: NC_010162:6562571 Sorangium cellulosum 'So ce 56', complete genome

Start: 6562571, End: 6602523, Length: 39953

Host Lineage: Sorangium cellulosum; Sorangium; Polyangiaceae; Myxococcales; Proteobacteria; Bacteria

General Information: Sorangium cellulosum 'So ce 56' produces a large number of bioactive compounds, such as, the antifungal soraphen and the anticancer agent epothilone. This organism, like other myxobacteria, undergoes a complex development and differentiation pathway. When cell density increases, the organism switches to "social motility" where aggregates of cells can gather together into masses termed fruiting bodies that may consist of up to 100 000 cells. The motility system is not dependent on flagella like most bacteria, but instead relies on twitching pili: short extracellular appendages that may function analogously to oars in a rowboat. The myxobacteria have proved to be a rich source of novel natural products. Sorangium cellulosum produces a number of antibacterial, antifungal and cytotoxic substances which are being studies for therapeutic applications.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_010162:97274659727465975781530351Sorangium cellulosum 'So ce 56', complete genome1e-166595BLASTN svgBLASTP svg
NC_010162:12652197126521971267209919903Sorangium cellulosum 'So ce 56', complete genome5e-52214BLASTN svgBLASTP svg
NC_010162:78999807899980792652426545Sorangium cellulosum 'So ce 56', complete genome1e-46196BLASTN svgBLASTP svg
NC_008463:3503576*3503576352773524160Pseudomonas aeruginosa UCBPP-PA14, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_011770:3735162*3735162376383628675Pseudomonas aeruginosa LESB58, complete genome5e-0661.9BLASTN svgBLASTP svg
NC_010162:93114659311465933490823444Sorangium cellulosum 'So ce 56', complete genome5e-0661.9BLASTN svgBLASTP svg
NC_002516:21131862113186213336720182Pseudomonas aeruginosa PAO1, complete genome5e-0661.9BLASTN svgBLASTP svg