Query: NC_010162:3177324 Sorangium cellulosum 'So ce 56', complete genome
Start: 3177324, End: 3197304, Length: 19981
Host Lineage: Sorangium cellulosum; Sorangium; Polyangiaceae; Myxococcales; Proteobacteria; Bacteria
General Information: Sorangium cellulosum 'So ce 56' produces a large number of bioactive compounds, such as, the antifungal soraphen and the anticancer agent epothilone. This organism, like other myxobacteria, undergoes a complex development and differentiation pathway. When cell density increases, the organism switches to "social motility" where aggregates of cells can gather together into masses termed fruiting bodies that may consist of up to 100 000 cells. The motility system is not dependent on flagella like most bacteria, but instead relies on twitching pili: short extracellular appendages that may function analogously to oars in a rowboat. The myxobacteria have proved to be a rich source of novel natural products. Sorangium cellulosum produces a number of antibacterial, antifungal and cytotoxic substances which are being studies for therapeutic applications.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
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NC_010162:2469915 | 2469915 | 2492944 | 23030 | Sorangium cellulosum 'So ce 56', complete genome | 0 | 652 | BLASTN svg | BLASTP svg |
NC_010162:10676864 | 10676864 | 10698230 | 21367 | Sorangium cellulosum 'So ce 56', complete genome | 7e-22 | 113 | BLASTN svg | BLASTP svg |
NC_015711:237526 | 237526 | 264759 | 27234 | Myxococcus fulvus HW-1 chromosome, complete genome | 2e-19 | 105 | BLASTN svg | BLASTP svg |
NC_009049:1125681 | 1125681 | 1161365 | 35685 | Rhodobacter sphaeroides ATCC 17029 chromosome 1, complete sequence | 7e-19 | 103 | BLASTN svg | BLASTP svg |
NC_010725:3961981 | 3961981 | 3984019 | 22039 | Methylobacterium populi BJ001, complete genome | 2e-16 | 95.6 | BLASTN svg | BLASTP svg |
NC_001263:243000* | 243000 | 267509 | 24510 | Deinococcus radiodurans R1 chromosome 1, complete sequence | 2e-16 | 95.6 | BLASTN svg | BLASTP svg |
NC_010505:1205747* | 1205747 | 1229049 | 23303 | Methylobacterium radiotolerans JCM 2831, complete genome | 1e-14 | 89.7 | BLASTN svg | BLASTP svg |
NC_008095:2011748 | 2011748 | 2030186 | 18439 | Myxococcus xanthus DK 1622, complete genome | 4e-14 | 87.7 | BLASTN svg | BLASTP svg |
NC_007947:1229807* | 1229807 | 1251583 | 21777 | Methylobacillus flagellatus KT, complete genome | 2e-13 | 85.7 | BLASTN svg | BLASTP svg |
NC_013854:330543 | 330543 | 353599 | 23057 | Azospirillum sp. B510, complete genome | 3e-12 | 81.8 | BLASTN svg | BLASTP svg |
NC_013716:1618249 | 1618249 | 1643078 | 24830 | Citrobacter rodentium ICC168, complete genome | 2e-10 | 75.8 | BLASTN svg | BLASTP svg |
NC_011420:2803196* | 2803196 | 2825142 | 21947 | Rhodospirillum centenum SW, complete genome | 6e-10 | 73.8 | BLASTN svg | BLASTP svg |
NC_013730:906389 | 906389 | 933032 | 26644 | Spirosoma linguale DSM 74, complete genome | 6e-10 | 73.8 | BLASTN svg | BLASTP svg |
NC_014666:7838500 | 7838500 | 7862098 | 23599 | Frankia sp. EuI1c chromosome, complete genome | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
NC_015656:132633* | 132633 | 169914 | 37282 | Frankia symbiont of Datisca glomerata chromosome, complete genome | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_014215:1190447* | 1190447 | 1214099 | 23653 | Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1, | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_007510:3340008 | 3340008 | 3375417 | 35410 | Burkholderia sp. 383 chromosome 1, complete sequence | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_002947:5961096 | 5961096 | 5984395 | 23300 | Pseudomonas putida KT2440, complete genome | 6e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_012856:207194 | 207194 | 238339 | 31146 | Ralstonia pickettii 12D chromosome 1, complete genome | 2e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_007643:578808* | 578808 | 602099 | 23292 | Rhodospirillum rubrum ATCC 11170, complete genome | 2e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_007086:1224867* | 1224867 | 1282734 | 57868 | Xanthomonas campestris pv. campestris str. 8004, complete genome | 9e-06 | 60 | BLASTN svg | BLASTP svg |
NC_003902:3666544* | 3666544 | 3741802 | 75259 | Xanthomonas campestris pv. campestris str. ATCC 33913, complete | 9e-06 | 60 | BLASTN svg | BLASTP svg |