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Query: NC_010162:12652197 Sorangium cellulosum 'So ce 56', complete genome

Start: 12652197, End: 12672099, Length: 19903

Host Lineage: Sorangium cellulosum; Sorangium; Polyangiaceae; Myxococcales; Proteobacteria; Bacteria

General Information: Sorangium cellulosum 'So ce 56' produces a large number of bioactive compounds, such as, the antifungal soraphen and the anticancer agent epothilone. This organism, like other myxobacteria, undergoes a complex development and differentiation pathway. When cell density increases, the organism switches to "social motility" where aggregates of cells can gather together into masses termed fruiting bodies that may consist of up to 100 000 cells. The motility system is not dependent on flagella like most bacteria, but instead relies on twitching pili: short extracellular appendages that may function analogously to oars in a rowboat. The myxobacteria have proved to be a rich source of novel natural products. Sorangium cellulosum produces a number of antibacterial, antifungal and cytotoxic substances which are being studies for therapeutic applications.

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_010162:9207000*9207000923316826169Sorangium cellulosum 'So ce 56', complete genome05277BLASTN svgBLASTP svg
NC_010162:8585856*8585856860409918244Sorangium cellulosum 'So ce 56', complete genome05275BLASTN svgBLASTP svg
NC_010162:78248787824878785192027043Sorangium cellulosum 'So ce 56', complete genome04666BLASTN svgBLASTP svg
NC_010162:85281168528116855329725182Sorangium cellulosum 'So ce 56', complete genome04189BLASTN svgBLASTP svg
NC_010162:87601288760128878109920972Sorangium cellulosum 'So ce 56', complete genome03279BLASTN svgBLASTP svg
NC_008095:20715002071500210351032011Myxococcus xanthus DK 1622, complete genome0858BLASTN svgBLASTP svg
NC_008095:75634417563441758702723587Myxococcus xanthus DK 1622, complete genome0842BLASTN svgBLASTP svg
NC_020126:73525973525976895033692Myxococcus stipitatus DSM 14675, complete genome1e-75291BLASTN svgBLASTP svg
NC_010162:65625716562571660252339953Sorangium cellulosum 'So ce 56', complete genome7e-53216BLASTN svgBLASTP svg
NC_010162:10764788*107647881078955024763Sorangium cellulosum 'So ce 56', complete genome4e-1487.7BLASTN svgBLASTP svg
NC_010162:10962500109625001098009917600Sorangium cellulosum 'So ce 56', complete genome6e-1073.8BLASTN svgBLASTP svg
NC_010162:51292705129270514915519886Sorangium cellulosum 'So ce 56', complete genome1e-0765.9BLASTN svgBLASTP svg