Some Help

Query: NC_010162:12224154 Sorangium cellulosum 'So ce 56', complete genome

Start: 12224154, End: 12254254, Length: 30101

Host Lineage: Sorangium cellulosum; Sorangium; Polyangiaceae; Myxococcales; Proteobacteria; Bacteria

General Information: Sorangium cellulosum 'So ce 56' produces a large number of bioactive compounds, such as, the antifungal soraphen and the anticancer agent epothilone. This organism, like other myxobacteria, undergoes a complex development and differentiation pathway. When cell density increases, the organism switches to "social motility" where aggregates of cells can gather together into masses termed fruiting bodies that may consist of up to 100 000 cells. The motility system is not dependent on flagella like most bacteria, but instead relies on twitching pili: short extracellular appendages that may function analogously to oars in a rowboat. The myxobacteria have proved to be a rich source of novel natural products. Sorangium cellulosum produces a number of antibacterial, antifungal and cytotoxic substances which are being studies for therapeutic applications.

Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia

Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_010162:85281168528116855329725182Sorangium cellulosum 'So ce 56', complete genome0872BLASTN svgBLASTP svg
NC_010162:8585856*8585856860409918244Sorangium cellulosum 'So ce 56', complete genome0789BLASTN svgBLASTP svg
NC_010162:93114659311465933490823444Sorangium cellulosum 'So ce 56', complete genome8e-35157BLASTN svgBLASTP svg
NC_010162:10442904104429041048465241749Sorangium cellulosum 'So ce 56', complete genome6e-1487.7BLASTN svgBLASTP svg
NC_010162:56517465651746567447022725Sorangium cellulosum 'So ce 56', complete genome4e-1281.8BLASTN svgBLASTP svg
NC_010162:11812211*118122111183306720857Sorangium cellulosum 'So ce 56', complete genome4e-0661.9BLASTN svgBLASTP svg