Query: NC_010162:11908749 Sorangium cellulosum 'So ce 56', complete genome
Start: 11908749, End: 11953336, Length: 44588
Host Lineage: Sorangium cellulosum; Sorangium; Polyangiaceae; Myxococcales; Proteobacteria; Bacteria
General Information: Sorangium cellulosum 'So ce 56' produces a large number of bioactive compounds, such as, the antifungal soraphen and the anticancer agent epothilone. This organism, like other myxobacteria, undergoes a complex development and differentiation pathway. When cell density increases, the organism switches to "social motility" where aggregates of cells can gather together into masses termed fruiting bodies that may consist of up to 100 000 cells. The motility system is not dependent on flagella like most bacteria, but instead relies on twitching pili: short extracellular appendages that may function analogously to oars in a rowboat. The myxobacteria have proved to be a rich source of novel natural products. Sorangium cellulosum produces a number of antibacterial, antifungal and cytotoxic substances which are being studies for therapeutic applications.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
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NC_010162:9351179 | 9351179 | 9374415 | 23237 | Sorangium cellulosum 'So ce 56', complete genome | 0 | 1084 | BLASTN svg | BLASTP svg |
NC_014013:301184* | 301184 | 326350 | 25167 | Sphingobium japonicum UT26S chromosome 2, complete genome | 2e-18 | 103 | BLASTN svg | BLASTP svg |
NC_013595:7109039 | 7109039 | 7141859 | 32821 | Streptosporangium roseum DSM 43021, complete genome | 1e-16 | 97.6 | BLASTN svg | BLASTP svg |
NC_013093:1157476* | 1157476 | 1176331 | 18856 | Actinosynnema mirum DSM 43827, complete genome | 1e-12 | 83.8 | BLASTN svg | BLASTP svg |
NC_008314:1465643* | 1465643 | 1515981 | 50339 | Ralstonia eutropha H16 chromosome 2, complete sequence | 9e-11 | 77.8 | BLASTN svg | BLASTP svg |
NC_009142:7820251 | 7820251 | 7839115 | 18865 | Saccharopolyspora erythraea NRRL 2338, complete genome | 3e-10 | 75.8 | BLASTN svg | BLASTP svg |
NC_013757:1544348* | 1544348 | 1582199 | 37852 | Geodermatophilus obscurus DSM 43160, complete genome | 2e-08 | 69.9 | BLASTN svg | BLASTP svg |
NC_014623:2283253 | 2283253 | 2306401 | 23149 | Stigmatella aurantiaca DW4/3-1 chromosome, complete genome | 3e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_008391:404388 | 404388 | 429815 | 25428 | Burkholderia cepacia AMMD chromosome 2, complete sequence | 3e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_012669:1493774 | 1493774 | 1515469 | 21696 | Beutenbergia cavernae DSM 12333, complete genome | 1e-06 | 63.9 | BLASTN svg | BLASTP svg |
NC_010067:660659* | 660659 | 688515 | 27857 | Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete | 1e-06 | 63.9 | BLASTN svg | BLASTP svg |
NC_021184:3841172 | 3841172 | 3874506 | 33335 | Desulfotomaculum gibsoniae DSM 7213, complete genome | 5e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_015671:3211972 | 3211972 | 3255300 | 43329 | Cellvibrio gilvus ATCC 13127 chromosome, complete genome | 5e-06 | 61.9 | BLASTN svg | BLASTP svg |