Pre_GI: BLASTP Hits

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Query: NC_010162:7824878:7827652 Sorangium cellulosum 'So ce 56', complete genome

Start: 7827652, End: 7828311, Length: 660

Host Lineage: Sorangium cellulosum; Sorangium; Polyangiaceae; Myxococcales; Proteobacteria; Bacteria

General Information: Sorangium cellulosum 'So ce 56' produces a large number of bioactive compounds, such as, the antifungal soraphen and the anticancer agent epothilone. This organism, like other myxobacteria, undergoes a complex development and differentiation pathway. When cell density increases, the organism switches to "social motility" where aggregates of cells can gather together into masses termed fruiting bodies that may consist of up to 100 000 cells. The motility system is not dependent on flagella like most bacteria, but instead relies on twitching pili: short extracellular appendages that may function analogously to oars in a rowboat. The myxobacteria have proved to be a rich source of novel natural products. Sorangium cellulosum produces a number of antibacterial, antifungal and cytotoxic substances which are being studies for therapeutic applications.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010410:3719599:373387537338753734471597Acinetobacter baumannii AYE, complete genomeputative transcription regulator protein (TetR family)9e-0753.9
NC_018691:3082000:308815230881523088802651Alcanivorax dieselolei B5 chromosome, complete genomeTranscriptional regulator, TetR family2e-0962.4
NC_009255:351695:351695351695352345651Burkholderia vietnamiensis G4 chromosome 2, complete sequenceTetR family transcriptional regulator5e-0754.3
NC_003910:3448983:346635434663543466986633Colwellia psychrerythraea 34H, complete genometranscriptional regulator, TetR family3e-0858.9
NC_015563:5162177:517872451787245179383660Delftia sp. Cs1-4 chromosome, complete genomeregulatory protein TetR3e-1272
NC_005125:839000:855551855551856189639Gloeobacter violaceus PCC 7421, complete genomeTetR family transcriptional regulatory protein3e-1995.1
NC_014323:292958:293971293971294603633Herbaspirillum seropedicae SmR1 chromosome, complete genometranscription regulator protein1e-0653.1
NC_011666:1923776:192555519255551926166612Methylocella silvestris BL2, complete genometranscriptional regulator, TetR family4e-0755.1
NC_006361:3132000:314393831439383144471534Nocardia farcinica IFM 10152, complete genomeputative transcriptional regulator2e-0859.3
NC_016830:4010637:401744440174444018088645Pseudomonas fluorescens F113 chromosome, complete genomeTetR family transcriptional regulator5e-1064.7
NC_016147:3349272:335056133505613351142582Pseudoxanthomonas spadix BD-a59 chromosome, complete genomeTetR family transcriptional regulator5e-0651.2
NC_003295:856775:862903862903863580678Ralstonia solanacearum GMI1000, complete genomePUTATIVE TRANSCRIPTION REGULATOR PROTEIN9e-0960.5
NC_014311:263963:302984302984303634651Ralstonia solanacearum PSI07 chromosome, complete genomeTetR family transcriptional regulator3e-1065.5
NC_009832:1664238:166517116651711665797627Serratia proteamaculans 568, complete genometranscriptional regulator, TetR family5e-1064.7
NC_003155:6444500:646353364635336464231699Streptomyces avermitilis MA-4680, complete genomeTetR-family transcriptional regulator5e-0961.2
NC_013929:6526745:654427865442786544955678Streptomyces scabiei 87.22 chromosome, complete genomeTetR family transcriptional regulator4e-1271.6
NC_013510:5394432:540910054091005409654555Thermomonospora curvata DSM 43183, complete genometranscriptional regulator, TetR family3e-1168.9
NC_013510:3065000:307158930715893072076488Thermomonospora curvata DSM 43183, complete genome3e-0755.5