Pre_GI: BLASTP Hits

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Query: NC_010162:2406976:2419163 Sorangium cellulosum 'So ce 56', complete genome

Start: 2419163, End: 2420521, Length: 1359

Host Lineage: Sorangium cellulosum; Sorangium; Polyangiaceae; Myxococcales; Proteobacteria; Bacteria

General Information: Sorangium cellulosum 'So ce 56' produces a large number of bioactive compounds, such as, the antifungal soraphen and the anticancer agent epothilone. This organism, like other myxobacteria, undergoes a complex development and differentiation pathway. When cell density increases, the organism switches to "social motility" where aggregates of cells can gather together into masses termed fruiting bodies that may consist of up to 100 000 cells. The motility system is not dependent on flagella like most bacteria, but instead relies on twitching pili: short extracellular appendages that may function analogously to oars in a rowboat. The myxobacteria have proved to be a rich source of novel natural products. Sorangium cellulosum produces a number of antibacterial, antifungal and cytotoxic substances which are being studies for therapeutic applications.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011027:1427343:1436693143669314408864194Chlorobaculum parvum NCIB 8327, complete genomemulti-sensor hybrid histidine kinase1e-24114
NC_013889:1514799:1514799151479915162501452Thioalkalivibrio sp. K90mix chromosome, complete genomediguanylate cyclase with PAS/PAC and GAF sensors5e-1892.8
NC_011420:365505:365505365505366332828Rhodospirillum centenum SW, complete genomesigma-B modulator protein8e-1892
NC_010162:11908749:1191809611918096119230604965Sorangium cellulosum 'So ce 56', complete genomeprotein kinase3e-1687
NC_011757:3486283:3524427352442735276243198Methylobacterium chloromethanicum CM4, complete genomePAS/PAC sensor hybrid histidine kinase8e-1685.5
NC_010172:798923:8596738596738628703198Methylobacterium extorquens PA1, complete genomePAS sensor protein1e-1584.7
NC_012988:769981:8362228362228394193198Methylobacterium extorquens DM4, complete genomesensor hybrid histidine kinase with multiple PAS/PAC and response regulator receiver domains3e-1583.6
NC_019673:6394319:645032664503266451171846Saccharothrix espanaensis DSM 44229 complete genomeAnti-sigma-factor antagonist4e-1582.8
NC_014924:2517068:252303525230352523886852Pseudoxanthomonas suwonensis 11-1 chromosome, complete genomeanti-sigma-factor antagonist9e-1582
NC_007907:4692336:4694056469405646959721917Desulfitobacterium hafniense Y51, complete genomehypothetical protein1e-1481.6
NC_010505:5525461:554987755498775550752876Methylobacterium radiotolerans JCM 2831, complete genomeanti-sigma-factor antagonist5e-1479.3
NC_015676:109743:1466261466261492982673Methanosalsum zhilinae DSM 4017 chromosome, complete genomesignal transduction histidine kinase1e-1378.2
NC_011757:517000:5364535364535397223270Methylobacterium chloromethanicum CM4, complete genomemulti-sensor hybrid histidine kinase3e-1377
NC_014657:473479:485782485782486474693Caldicellulosiruptor owensensis OL chromosome, complete genomeanti-sigma-factor antagonist3e-1376.6
NC_012918:1660477:1683690168369016861222433Geobacter sp. M21 chromosome, complete genomePAS/PAC sensor hybrid histidine kinase4e-1376.6
NC_013730:778076:7780767780767820053930Spirosoma linguale DSM 74, complete genomemulti-sensor hybrid histidine kinase4e-1376.6
NC_010505:5525461:5546057554605755497313675Methylobacterium radiotolerans JCM 2831, complete genomemulti-sensor hybrid histidine kinase1e-1275.1
NC_016940:3696570:369803236980323698667636Saprospira grandis str. Lewin chromosome, complete genomeanti-anti-sigma regulatory factor3e-1273.6
NC_019896:3491000:352063835206383521462825Bacillus subtilis subsp. subtilis str. BSP1 chromosome, completeModulator protein RsbR4e-1273.2
NC_009633:2725128:2741381274138127425831203Alkaliphilus metalliredigens QYMF chromosome, complete genomeGAF sensor signal transduction histidine kinase3e-1273.2
NC_014614:2434017:2452421245242124535961176Clostridium sticklandii, complete genomeputative GAF sensor signal transduction histidine kinase8e-1272
NC_014006:611592:6125216125216145842064Sphingobium japonicum UT26S chromosome 1, complete genomesignal transduction histidine kinase2e-1170.9
NC_015957:690817:706890706890707747858Streptomyces violaceusniger Tu 4113 chromosome, complete genomeanti-sigma-factor antagonist2e-1170.9
NC_016023:1083826:1104502110450211055211020Bacillus coagulans 36D1 chromosome, complete genomeanti-sigma-factor antagonist6e-1169.3
NC_014219:2253023:2253023225302322555842562Bacillus selenitireducens MLS10 chromosome, complete genomediguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s)1e-1068.2
NC_004193:375416:652243652243653112870Oceanobacillus iheyensis HTE831, complete genomepositive regulator of sigma-B activity3e-1066.6
NC_013061:2247191:2249297224929722528363540Pedobacter heparinus DSM 2366, complete genomePAS sensor protein7e-1065.9
NC_018704:347948:348751348751349620870Amphibacillus xylanus NBRC 15112, complete genomemodulator protein RsbR3e-0963.5
NC_010162:9502480:9518094951809495231905097Sorangium cellulosum 'So ce 56', complete genomeprotein kinase4e-0963.2
NC_010162:7620000:7620592762059276230152424Sorangium cellulosum 'So ce 56', complete genomeputative sugar regulator7e-0962.4
NC_010505:5525461:5554984555498455578242841Methylobacterium radiotolerans JCM 2831, complete genomemulti-sensor hybrid histidine kinase9e-0962
NC_014220:1162948:1181410118141011844843075Syntrophothermus lipocalidus DSM 12680 chromosome, complete genomediguanylate cyclase/phosphodiesterase with GAF sensor2e-0861.2
NC_019842:680000:707185707185708051867Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,hypothetical protein2e-0860.8
NC_009725:692237:717460717460718344885Bacillus amyloliquefaciens FZB42, complete genomeYetI2e-0860.8
NC_008044:136844:153682153682154578897Silicibacter sp. TM1040, complete genomeanti-sigma-factor antagonist2e-0860.5
NC_010511:3160123:3164569316456931677423174Methylobacterium sp. 4-46 chromosome, complete genomePAS/PAC sensor hybrid histidine kinase3e-0860.5
NC_020272:3245834:324583432458343246700867Bacillus amyloliquefaciens IT-45, complete genomepositive regulator of sigma-B activity3e-0860.5
NC_012969:142000:1446581446581460101353Methylovorus glucosetrophus SIP3-4 chromosome, complete genomePAS/PAC/GAF sensor-containing diguanylate cyclase4e-0859.7
NC_015379:1600715:1602802160280216041511350Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,Putative diguanylate cyclase with PAS/PAC and GAF sensors1e-0758.5
NC_010162:7824878:7843690784369078447571068Sorangium cellulosum 'So ce 56', complete genomehypothetical protein2e-0757.4
NC_014551:691594:712981712981713847867Bacillus amyloliquefaciens DSM 7, complete genomeSulphate transporter/antisigma-factor4e-0756.6
NC_017188:635901:656305656305657171867Bacillus amyloliquefaciens TA208 chromosome, complete genomeSulphate transporter/antisigma-factor4e-0756.6
NC_017191:641923:662327662327663193867Bacillus amyloliquefaciens XH7 chromosome, complete genomeRsbR protein4e-0756.6
NC_015634:2991669:301204930120493012873825Bacillus coagulans 2-6 chromosome, complete genomeanti-sigma-factor antagonist4e-0756.6
NC_011757:4293000:4334529433452943362501722Methylobacterium chloromethanicum CM4, complete genomePAS/PAC sensor hybrid histidine kinase4e-0756.6
NC_010162:3177324:3178645317864531808342190Sorangium cellulosum 'So ce 56', complete genomeLacI family transcription regulator5e-0756.2
NC_015563:3511951:3533202353320235356942493Delftia sp. Cs1-4 chromosome, complete genomePAS/PAC sensor hybrid histidine kinase6e-0652.8
NC_010002:4038500:4038892403889240418312940Delftia acidovorans SPH-1, complete genomePAS/PAC sensor hybrid histidine kinase6e-0652.8
NC_018876:2628966:2661537266153726637172181Methanolobus psychrophilus R15 chromosome, complete genomePAS/PAC sensor signal transduction histidine kinase9e-0652