Pre_GI: BLASTP Hits

Some Help

Query: NC_010162:2406976:2417230 Sorangium cellulosum 'So ce 56', complete genome

Start: 2417230, End: 2418192, Length: 963

Host Lineage: Sorangium cellulosum; Sorangium; Polyangiaceae; Myxococcales; Proteobacteria; Bacteria

General Information: Sorangium cellulosum 'So ce 56' produces a large number of bioactive compounds, such as, the antifungal soraphen and the anticancer agent epothilone. This organism, like other myxobacteria, undergoes a complex development and differentiation pathway. When cell density increases, the organism switches to "social motility" where aggregates of cells can gather together into masses termed fruiting bodies that may consist of up to 100 000 cells. The motility system is not dependent on flagella like most bacteria, but instead relies on twitching pili: short extracellular appendages that may function analogously to oars in a rowboat. The myxobacteria have proved to be a rich source of novel natural products. Sorangium cellulosum produces a number of antibacterial, antifungal and cytotoxic substances which are being studies for therapeutic applications.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011983:508287:5207735207735230972325Agrobacterium radiobacter K84 chromosome 2, complete genometranscriptional regulator protein7e-1995.1
NC_010814:2217153:2238961223896122422093249Geobacter lovleyi SZ, complete genomeputative phytochrome sensor protein3e-1892.8
NC_013939:1688400:1701781170178117049903210Deferribacter desulfuricans SSM1, complete genomeserine phosphatase2e-1687
NC_014315:3207684:3219592321959232218682277Nitrosococcus watsoni C-113 chromosome, complete genomeputative PAS/PAC sensor protein4e-1685.5
NC_014844:3469848:3485824348582434885982775Desulfovibrio aespoeensis Aspo-2 chromosome, complete genomePAS sensor protein6e-1685.1
NC_010162:2406976:2413825241382524162122388Sorangium cellulosum 'So ce 56', complete genomephosphoserine phosphatase6e-1685.1
NC_013960:452493:4651284651284671822055Nitrosococcus halophilus Nc4 chromosome, complete genomePAS sensor protein8e-1684.7
NC_016751:1700164:1703150170315017045621413Marinitoga piezophila KA3 chromosome, complete genomeserine phosphatase RsbU, regulator of sigma subunit6e-1582
NC_007484:3358000:3369303336930333715672265Nitrosococcus oceani ATCC 19707, complete genomePAS sensor, serine phosphatase RsbU regulator of sigma subunit7e-1581.6
NC_006510:1501487:1517620151762015203252706Geobacillus kaustophilus HTA426, complete genomehypothetical protein9e-1581.3
NC_007519:791679:7947047947047962121509Desulfovibrio alaskensis G20 chromosome, complete genomeserine phosphatase5e-1479
NC_010337:2339056:2351249235124923524331185Heliobacterium modesticaldum Ice1, complete genomeresponse regulator receiver modulated serine phosphatase5e-1375.5
NC_013223:1763631:1767581176758117688101230Desulfohalobium retbaense DSM 5692, complete genomeputative PAS/PAC sensor protein5e-1375.5
NC_008536:5421036:5441250544125054424371188Solibacter usitatus Ellin6076, complete genomeresponse regulator receiver modulated serine phosphatase5e-1375.5
NC_012108:904260:9267529267529284521701Desulfobacterium autotrophicum HRM2, complete genomeRsbP7e-1374.7
NC_008009:2430509:2437727243772724387521026Acidobacteria bacterium Ellin345, complete genomeserine phosphatase4e-1272.8
NC_006576:1743500:1760393176039317617811389Synechococcus elongatus PCC 6301, complete genomehypothetical protein4e-1272.4
NC_007604:2555000:2555003255500325563911389Synechococcus elongatus PCC 7942, complete genomeserine phosphatase4e-1272.4
NC_016622:170000:1881271881271893501224Azospirillum lipoferum 4B, complete genomeputative two-component response regulator7e-1271.6
NC_006138:1571878:1571878157187815739772100Desulfotalea psychrophila LSv54, complete genomesimilar to ICFG protein2e-1170.5
NC_008011:1394777:1409027140902714110302004Lawsonia intracellularis PHE/MN1-00, complete genomeputative regulator4e-1169.3
NC_013790:85889:1007111007111025821872Methanobrevibacter ruminantium M1 chromosome, complete genomeserine phosphatase5e-1168.9
NC_017059:2771085:2818972281897228212362265Rhodospirillum photometricum DSM 122, complete genomeSerine phosphatase RsbU regulator sigma subunit2e-1066.6
NC_007205:60069:7711577115784611347Candidatus Pelagibacter ubique HTCC1062, complete genomeSigma factor sigB regulation protein4e-1065.9
NC_020134:2772500:2791407279140727925461140Clostridium stercorarium subsp. stercorarium DSM 8532, completeputative phosphatase6e-1065.1
NC_009664:570768:5737565737565755071752Kineococcus radiotolerans SRS30216, complete genomeputative PAS/PAC sensor protein2e-0963.5
NC_004605:1092476:1108107110810711093271221Vibrio parahaemolyticus RIMD 2210633 chromosome II, completeputative two-component response regulator3e-0963.2
NC_015565:2827444:2832013283201328332181206Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completeprotein serine/threonine phosphatase3e-0962.8
NC_004193:375416:6539466539466549591014Oceanobacillus iheyensis HTE831, complete genomeindirect positive regulator of sigma-B activity6e-0962
NC_015957:336500:3380803380803394861407Streptomyces violaceusniger Tu 4113 chromosome, complete genomeprotein serine/threonine phosphatase1e-0860.8
NC_014614:478578:4929924929924946951704Clostridium sticklandii, complete genomeputative Serine phosphatase precursor2e-0860.1
NC_012796:4693500:4710180471018047113341155Desulfovibrio magneticus RS-1, complete genomeresponse regulator receiver protein2e-0860.1
NC_015671:3211972:3231317323131732335992283Cellvibrio gilvus ATCC 13127 chromosome, complete genomeputative PAS/PAC sensor protein3e-0859.3
NC_010655:1808657:1810066181006618117031638Akkermansia muciniphila ATCC BAA-835, complete genomeputative PAS/PAC sensor protein6e-0858.5
NC_014219:567033:5670335670335680461014Bacillus selenitireducens MLS10 chromosome, complete genomeprotein serine/threonine phosphatase6e-0858.5
NC_007512:944941:9756209756209775511932Pelodictyon luteolum DSM 273, complete genomeserine phosphatase7e-0858.2
NC_016751:1227495:1237036123703612381901155Marinitoga piezophila KA3 chromosome, complete genomeserine phosphatase RsbU, regulator of sigma subunit2e-0756.6
NC_010162:1222000:1243753124375312455251773Sorangium cellulosum 'So ce 56', complete genomehypothetical protein2e-0756.6
NC_007512:1162949:1181383118138311833561974Pelodictyon luteolum DSM 273, complete genomeserine phosphatase2e-0756.6
NC_014165:2081914:210025221002522101181930Thermobispora bispora DSM 43833 chromosome, complete genomeprotein serine/threonine phosphatase3e-0756.2
NC_014392:2513529:2513529251352925146261098Caldicellulosiruptor obsidiansis OB47 chromosome, complete genomeputative PAS/PAC sensor protein5e-0755.5
NC_012559:768939:7871377871377896412505Laribacter hongkongensis HLHK9, complete genomePutative PAS/PAC sensor protein5e-0755.5
NC_015573:569625:571222571222571938717Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomeprotein serine/threonine phosphatase7e-0755.1
NC_014377:1512217:151438815143881515113726Thermosediminibacter oceani DSM 16646 chromosome, complete genomeprotein serine/threonine phosphatase1e-0654.7
NC_013410:2691437:2693584269358426949061323Fibrobacter succinogenes subsp. succinogenes S85 chromosome,protein serine/threonine phosphatase1e-0654.3
NC_006582:883922:8843548843548853701017Bacillus clausii KSM-K16, complete genomeindirect positive regulator of sigma-B activity2e-0653.1
NC_018704:347948:3504003504003514101011Amphibacillus xylanus NBRC 15112, complete genomephosphoserine phosphatase RsbU4e-0652.4