Pre_GI: BLASTP Hits

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Query: NC_010162:10442904:10447332 Sorangium cellulosum 'So ce 56', complete genome

Start: 10447332, End: 10447967, Length: 636

Host Lineage: Sorangium cellulosum; Sorangium; Polyangiaceae; Myxococcales; Proteobacteria; Bacteria

General Information: Sorangium cellulosum 'So ce 56' produces a large number of bioactive compounds, such as, the antifungal soraphen and the anticancer agent epothilone. This organism, like other myxobacteria, undergoes a complex development and differentiation pathway. When cell density increases, the organism switches to "social motility" where aggregates of cells can gather together into masses termed fruiting bodies that may consist of up to 100 000 cells. The motility system is not dependent on flagella like most bacteria, but instead relies on twitching pili: short extracellular appendages that may function analogously to oars in a rowboat. The myxobacteria have proved to be a rich source of novel natural products. Sorangium cellulosum produces a number of antibacterial, antifungal and cytotoxic substances which are being studies for therapeutic applications.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009937:4768500:479176947917694792473705Azorhizobium caulinodans ORS 571, complete genomeDNA repair protein3e-0858.5
NC_007645:5801295:581587058158705816421552Hahella chejuensis KCTC 2396, complete genomeDNA repair protein8e-0857
NC_020541:2769419:278112927811292781614486Rhodanobacter sp. 2APBS1, complete genomeDNA repair protein1e-0756.6
NC_007645:5747721:574772157477215748272552Hahella chejuensis KCTC 2396, complete genomeDNA repair protein8e-0857
NC_007645:6647500:666580366658036666174372Hahella chejuensis KCTC 2396, complete genomeDNA repair protein2e-0755.8
NC_014335:4181710:419018041901804190857678Bacillus cereus biovar anthracis str. CI chromosome, completeDNA repair protein5e-0754.7
NC_005139:796546:812421812421812918498Vibrio vulnificus YJ016 chromosome I, complete sequenceDNA repair protein7e-0753.9
NC_013353:5272863:528877552887755289317543Escherichia coli O103:H2 str. 12009, complete genomeDNA repair protein1e-0653.5
NC_008600:4263505:426584242658424266468627Bacillus thuringiensis str. Al Hakam, complete genomeDNA repair protein2e-0652.8
NC_008255:1701195:172317917231791723880702Cytophaga hutchinsonii ATCC 33406, complete genomeDNA repair protein5e-1477.8
NC_005139:2201820:227281922728192273373555Vibrio vulnificus YJ016 chromosome I, complete sequenceDNA repair protein1e-0963.2
NC_010162:10442904:104462471044624710446717471Sorangium cellulosum 'So ce 56', complete genomeDNA repair protein2e-38158
NC_013037:6209424:621215862121586212862705Dyadobacter fermentans DSM 18053, complete genomeDNA repair protein RadC5e-0857.8
NC_016771:4195888:420322942032294203906678Bacillus cereus NC7401, complete genomeDNA repair protein RadC2e-0756.2
NC_006274:4295730:430390443039044304581678Bacillus cereus E33L, complete genomeDNA repair protein RadC2e-0756.2
NC_018867:10238:3771937719395181800Dehalobacter sp. CF chromosome, complete genomeDNA repair protein RadC2e-0755.5
NC_012668:62500:803358033580808474Vibrio cholerae MJ-1236 chromosome 1, complete sequenceDNA repair protein RadC4e-0754.7
NC_005957:4244019:424905242490524249729678Bacillus thuringiensis serovar konkukian str. 97-27, completeDNA repair protein RadC5e-0754.7
NC_012472:4255729:426419942641994264876678Bacillus cereus 03BB102, complete genomeDNA repair protein RadC5e-0754.7
NC_003909:4209385:421273742127374213414678Bacillus cereus ATCC 10987, complete genomeDNA repair protein RadC6e-0754.3
NC_015410:3093465:314020931402093140715507Pseudomonas mendocina NK-01 chromosome, complete genomeDNA repair protein RadC8e-0753.9
NC_010184:4287999:429533742953374296014678Bacillus weihenstephanensis KBAB4, complete genomeDNA repair protein RadC2e-0652.8
NC_015740:2407500:242588724258872426384498Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completeDNA repair protein RadC2e-0652.4
NC_016584:5388500:540973654097365410419684Desulfosporosinus orientis DSM 765 chromosome, complete genomeDNA repair protein radc3e-0652
NC_012668:1688500:171091017109101711386477Vibrio cholerae MJ-1236 chromosome 1, complete sequenceDNA repair protein RadC8e-1063.5
NC_015422:1694363:170114717011471701653507Alicycliphilus denitrificans K601 chromosome, complete genomeDNA repair protein RadC6e-0960.8
NC_010718:517473:537139537139537864726Natranaerobius thermophilus JW/NM-WN-LF, complete genomeDNA repair protein RadC8e-0857
NC_011661:906583:907417907417908103687Dictyoglomus turgidum DSM 6724, complete genomeDNA repair protein RadC1e-0756.2
NC_010730:627465:647288647288647977690Sulfurihydrogenibium sp. YO3AOP1, complete genomeDNA repair protein RadC2e-0756.2
NC_020064:3609844:363411436341143634656543Serratia marcescens FGI94, complete genomeDNA repair protein radc2e-0755.8
NC_012659:4252000:425949242594924260169678Bacillus anthracis str. A0248, complete genomeDNA repair protein RadC5e-0754.7
NC_007530:4251773:425959242595924260269678Bacillus anthracis str. 'Ames Ancestor', complete genomeDNA repair protein RadC5e-0754.7
NC_019897:2645404:265060326506032651292690Thermobacillus composti KWC4 chromosome, complete genomeDNA repair protein radc8e-0753.9
NC_012918:928903:934349934349934849501Geobacter sp. M21 chromosome, complete genomeDNA repair protein RadC3e-0652
NC_016816:1137904:114958211495821150124543Pantoea ananatis LMG 5342, complete genomeDNA repair protein RadC3e-0652
NC_010694:63654:852328523285903672Erwinia tasmaniensis, complete genomeDNA repair protein RadC6e-0650.8
NC_016445:1363831:140752214075221407998477Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completeDNA repair protein RadC8e-1063.5
NC_009457:1444449:148922414892241489700477Vibrio cholerae O395 chromosome 2, complete sequenceDNA repair protein RadC8e-1063.5
NC_010084:2484000:253027425302742530783510Burkholderia multivorans ATCC 17616 chromosome 1, completeDNA repair protein RadC1e-0963.2
NC_011725:4428726:442990344299034430580678Bacillus cereus B4264 chromosome, complete genomeDNA repair protein RadC3e-0858.5
NC_011992:1318691:133356113335611334067507Acidovorax ebreus TPSY, complete genomeDNA repair protein RadC4e-0858.2
NC_008609:1976403:203671820367182037218501Pelobacter propionicus DSM 2379, complete genomeDNA repair protein RadC1e-0756.6
NC_011658:4243561:424944642494464250123678Bacillus cereus AH187 chromosome, complete genomeDNA repair protein RadC2e-0756.2
NC_015556:2265940:229892422989242299430507Pseudomonas fulva 12-X chromosome, complete genomeDNA repair protein RadC4e-0754.7
NC_009052:4168776:418616841861684186611444Shewanella baltica OS155, complete genomeDNA repair protein RadC5e-0754.3
NC_014931:5088125:511832051183205118997678Variovorax paradoxus EPS chromosome, complete genomeDNA repair protein RadC2e-0652.8
NC_009050:811358:838293838293838709417Rhodobacter sphaeroides ATCC 17029 chromosome 2, complete sequenceDNA repair protein RadC3e-0652
NC_008609:2446246:245329824532982453798501Pelobacter propionicus DSM 2379, complete genomeDNA repair protein RadC4e-0651.2
NC_013446:4281250:429934642993464300038693Comamonas testosteroni CNB-2, complete genomeDNA repair protein RadC8e-0650.4
NC_016944:1978058:198242919824291982905477Vibrio cholerae IEC224 chromosome I, complete sequenceDNA repair protein RadC8e-1063.5
NC_009617:588897:591420591420592109690Clostridium beijerinckii NCIMB 8052 chromosome, complete genomeDNA repair protein RadC9e-0960.5
NC_014171:4317520:432015043201504320827678Bacillus thuringiensis BMB171 chromosome, complete genomeDNA repair protein radC3e-0858.5
NC_011772:4397599:439759943975994398276678Bacillus cereus G9842, complete genomeDNA repair protein RadC8e-0857
NC_011969:4140000:414737041473704148047678Bacillus cereus Q1 chromosome, complete genomeDNA repair protein radc2e-0756.2
NC_005945:4251789:425996442599644260641678Bacillus anthracis str. Sterne, complete genomeDNA repair protein RadC5e-0754.7
NC_003997:4252000:425946542594654260142678Bacillus anthracis str. Ames, complete genomeDNA repair protein RadC5e-0754.7
NC_014972:409884:409884409884410621738Desulfobulbus propionicus DSM 2032 chromosome, complete genomeDNA repair protein RadC1e-0653.1
NC_009439:1297851:133081213308121331309498Pseudomonas mendocina ymp, complete genomeDNA repair protein RadC2e-0652.8
NC_015966:2841420:285394328539432854680738Rhodothermus marinus SG0.5JP17-172 chromosome, complete genomeDNA repair protein RadC3e-0652
NC_010322:5293652:530406853040685304556489Pseudomonas putida GB-1 chromosome, complete genomeDNA repair protein RadC4e-0651.6
NC_011283:4966471:498446149844614984946486Klebsiella pneumoniae 342 chromosome, complete genomeDNA repair protein RadC8e-0650.4
NC_018876:2604055:262305726230572623746690Methanolobus psychrophilus R15 chromosome, complete genomeDNA repair protein RadC1e-1066.6
NC_008577:1455000:146655414665541467063510Shewanella sp. ANA-3 chromosome 1, complete sequenceDNA repair protein RadC1e-0963.2
NC_017270:1755552:177484717748471775263417Vibrio cholerae LMA3984-4 chromosome chromosome I, completeDNA repair protein RadC4e-0961.2
NC_009699:3217315:323771832377183238404687Clostridium botulinum F str. Langeland chromosome, complete genomeDNA repair protein RadC8e-0960.5
NC_011894:7563668:759999675999967600724729Methylobacterium nodulans ORS 2060, complete genomeDNA repair protein RadC2e-0858.9
NC_010688:3030873:306701430670143067493480Xanthomonas campestris pv. campestris, complete genomeDNA repair protein radC homolog1e-0653.1
NC_010688:3515885:355014635501463550625480Xanthomonas campestris pv. campestris, complete genomeDNA repair protein radC homolog6e-0650.8
NC_010688:1192410:121789312178931218372480Xanthomonas campestris pv. campestris, complete genomeDNA repair protein radC homolog5e-0857.8
NC_010170:3944228:398185339818533982386534Bordetella petrii, complete genomeDNA repair protein radC homolog4e-0858.2
NC_002505:1931750:193612119361211936597477Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completeDNA repair protein RadC, putative8e-1063.5
NC_021150:3667176:367164436716443672150507Azotobacter vinelandii CA6, complete genomeDNA repair protein RadC-like protein6e-0960.8
NC_012560:3667177:367164536716453672151507Azotobacter vinelandii DJ, complete genomeDNA repair protein RadC-like protein6e-0960.8
NC_016944:514742:539538539538540011474Vibrio cholerae IEC224 chromosome I, complete sequenceDNA repair protein RadC-likeprotein3e-0652
NC_016602:173314:183739183739184212474Vibrio furnissii NCTC 11218 chromosome 1, complete sequenceDNA repair protein RadC-related protein1e-0653.1
NC_002505:514732:539531539531540004474Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completeDNA repair protein RadC-related protein4e-0754.7
NC_018678:2382708:239727923972792397743465Alteromonas macleodii str. 'English Channel 673' chromosome,DNA repair protein, prophage protein1e-0756.2
NC_010516:3234791:325519432551943255880687Clostridium botulinum B1 str. Okra, complete genomeDNA repair protein, RadC family3e-0858.5
NC_012563:3416509:343368934336893434375687Clostridium botulinum A2 str. Kyoto, complete genomeDNA repair protein, RadC family3e-0858.5
NC_003295:2787371:282272928227292823238510Ralstonia solanacearum GMI1000, complete genomehypothetical protein3e-0858.5
NC_011415:308825:326714326714327256543Escherichia coli SE11 chromosome, complete genomehypothetical protein3e-0755.1
NC_014614:2643203:265763126576312658110480Clostridium sticklandii, complete genomehypothetical protein9e-0857
NC_017200:4267408:427244042724404273117678Bacillus thuringiensis serovar finitimus YBT-020 chromosome,hypothetical protein1e-0653.1
NC_010554:2646806:266867826686782669175498Proteus mirabilis HI4320, complete genomeplasmid-related DNA repair protein2e-0755.8
AP010958:5272863:528877552887755289317543Escherichia coli O103:H2 str. 12009 DNA, complete genomepredicted DNA repair protein1e-0653.5
NC_004663:44647:752587525875710453Bacteroides thetaiotaomicron VPI-5482, complete genomeputative DNA repair protein2e-0652.8
NC_003228:2010643:206553420655342065977444Bacteroides fragilis NCTC 9343, complete genomeputative DNA repair protein2e-0652.4
NC_015379:2417312:243697224369722437463492Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative DNA repair protein8e-0650.4
NC_015379:908904:956123956123956620498Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,Putative DNA repair protein1e-0653.1
NC_016776:5174606:518547251854725185915444Bacteroides fragilis 638R, complete genomeputative DNA repair protein3e-0652
NC_016612:443398:455833455833456279447Klebsiella oxytoca KCTC 1686 chromosome, complete genomeputative DNA repair protein3e-0858.5
NC_009138:1843998:186754818675481868048501Herminiimonas arsenicoxydans, complete genomeputative DNA repair protein in putative prophage region (radC-like)3e-0651.6
NC_017068:1327025:134900213490021349586585Selenomonas ruminantium subsp. lactilytica TAM6421, completeputative DNA repair protein RadC1e-1066.6
NC_010981:1371265:141805814180581418726669Wolbachia pipientis, complete genomePutative dna repair protein radc2e-0858.9
NC_017068:1327025:135238313523831352967585Selenomonas ruminantium subsp. lactilytica TAM6421, completeputative DNA repair protein RadC2e-1272
NC_010981:468465:488966488966489634669Wolbachia pipientis, complete genomePutative dna repair protein radc2e-0858.9
NC_012578:1838470:188325418832541883730477Vibrio cholerae M66-2 chromosome I, complete sequenceputative DNA repair protein RadC8e-1063.5
NC_012582:2013515:202064320206432021119477Vibrio cholerae O395 chromosome chromosome I, complete sequenceputative DNA repair protein RadC8e-1063.5
NC_017271:3641705:368169136816913682170480Xanthomonas campestris pv. raphani 756C chromosome, completeRadC family DNA repair protein4e-0755.1
NC_016010:1822212:183260918326091833169561Xanthomonas axonopodis pv. citrumelo F1 chromosome, completeRadC family DNA repair protein1e-0653.1
NC_007508:1221500:124695612469561247435480Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeRadC family DNA repair protein3e-0755.5
NC_007508:3865000:389168138916813892244564Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeRadC family DNA repair protein6e-0754.3
NC_009348:2247500:225712522571252257616492Aeromonas salmonicida subsp. salmonicida A449, complete genomeRadC family DNA repair protein9e-0753.5
NC_003919:3812778:385070738507073851270564Xanthomonas axonopodis pv. citri str. 306, complete genomeRadC family protein5e-0754.3
NC_007086:3118116:315164631516463152125480Xanthomonas campestris pv. campestris str. 8004, complete genomeRadC family protein1e-0756.2
NC_003902:1858349:188770318877031888182480Xanthomonas campestris pv. campestris str. ATCC 33913, completeRadC family protein1e-0756.2
NC_018691:3041851:305065230506523051161510Alcanivorax dieselolei B5 chromosome, complete genomeRadC-like protein3e-0962