Pre_GI: BLASTP Hits

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Query: NC_010162:10442904:10446247 Sorangium cellulosum 'So ce 56', complete genome

Start: 10446247, End: 10446717, Length: 471

Host Lineage: Sorangium cellulosum; Sorangium; Polyangiaceae; Myxococcales; Proteobacteria; Bacteria

General Information: Sorangium cellulosum 'So ce 56' produces a large number of bioactive compounds, such as, the antifungal soraphen and the anticancer agent epothilone. This organism, like other myxobacteria, undergoes a complex development and differentiation pathway. When cell density increases, the organism switches to "social motility" where aggregates of cells can gather together into masses termed fruiting bodies that may consist of up to 100 000 cells. The motility system is not dependent on flagella like most bacteria, but instead relies on twitching pili: short extracellular appendages that may function analogously to oars in a rowboat. The myxobacteria have proved to be a rich source of novel natural products. Sorangium cellulosum produces a number of antibacterial, antifungal and cytotoxic substances which are being studies for therapeutic applications.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010162:10442904:104473321044733210447967636Sorangium cellulosum 'So ce 56', complete genomeDNA repair protein RadC6e-39159
NC_010981:468465:488966488966489634669Wolbachia pipientis, complete genomePutative dna repair protein radc4e-0857.4
NC_010981:1371265:141805814180581418726669Wolbachia pipientis, complete genomePutative dna repair protein radc4e-0857.4
NC_010730:627465:647288647288647977690Sulfurihydrogenibium sp. YO3AOP1, complete genomeDNA repair protein RadC1e-0755.5
NC_009617:588897:591420591420592109690Clostridium beijerinckii NCIMB 8052 chromosome, complete genomeDNA repair protein RadC2e-0755.1
NC_017068:1327025:135238313523831352967585Selenomonas ruminantium subsp. lactilytica TAM6421, completeputative DNA repair protein RadC2e-0755.1
NC_009937:4768500:479176947917694792473705Azorhizobium caulinodans ORS 571, complete genomeDNA repair protein2e-0755.1
NC_008609:1976403:203671820367182037218501Pelobacter propionicus DSM 2379, complete genomeDNA repair protein RadC2e-0755.1
NC_018876:2604055:262305726230572623746690Methanolobus psychrophilus R15 chromosome, complete genomeDNA repair protein RadC2e-0754.7
NC_002505:1931750:193612119361211936597477Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completeDNA repair protein RadC, putative4e-0753.9
NC_009457:1444449:148922414892241489700477Vibrio cholerae O395 chromosome 2, complete sequenceDNA repair protein RadC4e-0753.9
NC_012578:1838470:188325418832541883730477Vibrio cholerae M66-2 chromosome I, complete sequenceputative DNA repair protein RadC4e-0753.9
NC_012582:2013515:202064320206432021119477Vibrio cholerae O395 chromosome chromosome I, complete sequenceputative DNA repair protein RadC4e-0753.9
NC_012668:1688500:171091017109101711386477Vibrio cholerae MJ-1236 chromosome 1, complete sequenceDNA repair protein RadC4e-0753.9
NC_016445:1363831:140752214075221407998477Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completeDNA repair protein RadC4e-0753.9
NC_016944:1978058:198242919824291982905477Vibrio cholerae IEC224 chromosome I, complete sequenceDNA repair protein RadC4e-0753.9
NC_007645:5801295:581587058158705816421552Hahella chejuensis KCTC 2396, complete genomeDNA repair protein6e-0753.1
NC_007645:5747721:574772157477215748272552Hahella chejuensis KCTC 2396, complete genomeDNA repair protein7e-0753.1
NC_010084:2484000:253027425302742530783510Burkholderia multivorans ATCC 17616 chromosome 1, completeDNA repair protein RadC9e-0752.8
NC_016612:443398:455833455833456279447Klebsiella oxytoca KCTC 1686 chromosome, complete genomeputative DNA repair protein9e-0752.8
NC_005139:2201820:227281922728192273373555Vibrio vulnificus YJ016 chromosome I, complete sequenceDNA repair protein1e-0652.4
NC_012918:928903:934349934349934849501Geobacter sp. M21 chromosome, complete genomeDNA repair protein RadC2e-0652
NC_006831:1039142:105358810535881054280693Ehrlichia ruminantium str. Gardel, complete genomeDNA repair protein radC homolog1e-0652
NC_011894:7563668:759999675999967600724729Methylobacterium nodulans ORS 2060, complete genomeDNA repair protein RadC2e-0651.6
NC_010170:3944228:398185339818533982386534Bordetella petrii, complete genomeDNA repair protein radC homolog2e-0651.2
NC_012560:3667177:367164536716453672151507Azotobacter vinelandii DJ, complete genomeDNA repair protein RadC-like protein2e-0651.2
NC_021150:3667176:367164436716443672150507Azotobacter vinelandii CA6, complete genomeDNA repair protein RadC-like protein2e-0651.2
NC_006832:1051500:106150010615001062192693Ehrlichia ruminantium str. Welgevonden, complete genomeDNA repair protein radC homolog2e-0651.2
NC_005295:1067421:108278910827891083481693Ehrlichia ruminantium str. Welgevonden, complete genomeDNA repair protein RadC2e-0651.2
NC_009052:4168776:418616841861684186611444Shewanella baltica OS155, complete genomeDNA repair protein RadC4e-0650.8
NC_015422:1694363:170114717011471701653507Alicycliphilus denitrificans K601 chromosome, complete genomeDNA repair protein RadC3e-0650.8
NC_019897:2645404:265060326506032651292690Thermobacillus composti KWC4 chromosome, complete genomeDNA repair protein radc3e-0650.8
NC_009050:811358:838293838293838709417Rhodobacter sphaeroides ATCC 17029 chromosome 2, complete sequenceDNA repair protein RadC3e-0650.8
NC_008609:2446246:245329824532982453798501Pelobacter propionicus DSM 2379, complete genomeDNA repair protein RadC3e-0650.8
NC_014972:409884:409884409884410621738Desulfobulbus propionicus DSM 2032 chromosome, complete genomeDNA repair protein RadC4e-0650.4
NC_015379:908904:956123956123956620498Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,Putative DNA repair protein4e-0650.4
NC_008577:1455000:146655414665541467063510Shewanella sp. ANA-3 chromosome 1, complete sequenceDNA repair protein RadC5e-0650.4
NC_010554:2646806:266867826686782669175498Proteus mirabilis HI4320, complete genomeplasmid-related DNA repair protein6e-0650.1
NC_015437:438538:465545465545466234690Selenomonas sputigena ATCC 35185 chromosome, complete genomeDNA repair protein RadC7e-0649.7
NC_013037:6209424:621215862121586212862705Dyadobacter fermentans DSM 18053, complete genomeDNA repair protein RadC7e-0649.7
NC_017270:1755552:177484717748471775263417Vibrio cholerae LMA3984-4 chromosome chromosome I, completeDNA repair protein RadC8e-0649.3
NC_014171:4317520:432015043201504320827678Bacillus thuringiensis BMB171 chromosome, complete genomeDNA repair protein radC1e-0549.3
NC_011725:4428726:442990344299034430580678Bacillus cereus B4264 chromosome, complete genomeDNA repair protein RadC1e-0549.3