Pre_GI: BLASTN Hits

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Query: NC_010161:2381195 Bartonella tribocorum CIP 105476, complete genome

Start: 2381195, End: 2404099, Length: 22905

Host Lineage: Bartonella tribocorum; Bartonella; Bartonellaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This organism was isolated from the blood of wild rats and from fleas obtained from wild rats. Transmission of these organisms is often through an insect vector. Once in a host, this intracellular pathogen is internalized by an actin-dependent mechanism, and primarily targets endothelial cells, although other cells can be infected. The proliferation of the vascular endothelium (bacillary angiomatosis) is characterisitic of Bartonella infection and results in multiplication of the bacterium's host cells. Infected macrophages are stimulated to release vascular endothelial growth factor (VEGF) and interleukin 1 beta, both of which promote angiogenesis. Endothelial cells are also stimulated to grow and divide by direct contact with bacterial cells. In addition, programmed cell death (apoptosis) of endothelial cells is inhibited, combatting a common mechanism eukaryotic cells use to deal with bacterial infection. Other pathogenicity factors include pili and outer membrane adhesins for attachment to host cells. This organism is genetically related to Bartonella elizabethae which was isolated from a case of endocarditis in a human.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_008009:5139896*5139896517800338108Acidobacteria bacterium Ellin345, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_021171:4588792*4588792464231253521Bacillus sp. 1NLA3E, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_008783:119758*11975814350023743Bartonella bacilliformis KC583, complete genome01168BLASTN svgBLASTP svg
NC_014932:1387818*1387818140981421997Bartonella clarridgeiae 73, complete genome01136BLASTN svgBLASTP svg
NC_012846:2154000*2154000217726123262Bartonella grahamii as4aup, complete genome08094BLASTN svgBLASTP svg
NC_012846:986877986877102533738461Bartonella grahamii as4aup, complete genome2e-170607BLASTN svgBLASTP svg
NC_012846:17088401708840173059921760Bartonella grahamii as4aup, complete genome2e-68268BLASTN svgBLASTP svg
NC_012846:92957092957095327323704Bartonella grahamii as4aup, complete genome3e-37165BLASTN svgBLASTP svg
NC_005956:1888500*1888500190609917600Bartonella henselae str. Houston-1, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_010161:25482542548254257609927846Bartonella tribocorum CIP 105476, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_010161:1179000*1179000119858119582Bartonella tribocorum CIP 105476, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_010161:1501758*1501758153237830621Bartonella tribocorum CIP 105476, complete genome2e-19105BLASTN svgBLASTP svg
NC_010161:596034*59603462009924066Bartonella tribocorum CIP 105476, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_008618:1804610*1804610183073726128Bifidobacterium adolescentis ATCC 15703, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_012225:21272721272723571322987Brachyspira hyodysenteriae WA1, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_018607:895204*89520491374618543Brachyspira pilosicoli B2904 chromosome, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_010830:11717811171781119624424464Candidatus Amoebophilus asiaticus 5a2, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_015722:1050023*1050023107209922077Candidatus Midichloria mitochondrii IricVA chromosome, complete4e-0867.9BLASTN svgBLASTP svg
NC_007205:22153922153924436122823Candidatus Pelagibacter ubique HTCC1062, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_014934:1315106*1315106134075625651Cellulophaga algicola DSM 14237 chromosome, complete genome6e-32147BLASTN svgBLASTP svg
NC_015167:1154497*1154497118273428238Cellulophaga lytica DSM 7489 chromosome, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_021182:4427468*4427468445021222745Clostridium pasteurianum BC1, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_010336:996661*996661105214055480Francisella philomiragia subsp. philomiragia ATCC 25017, complete3e-0661.9BLASTN svgBLASTP svg
NC_009749:1699152*1699152175595256801Francisella tularensis subsp. holarctica FTA, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_008369:1702885*1702885175731754433Francisella tularensis subsp. holarctica OSU18, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_007880:1703346*1703346176005556710Francisella tularensis subsp. holarctica, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_010677:96470*9647014828851819Francisella tularensis subsp. mediasiatica FSC147, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_008601:1733940*1733940179060556666Francisella tularensis subsp. novicida U112, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_006570:24636*246367715752522Francisella tularensis subsp. tularensis Schu 4, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_013009:689978*68997871274122764Neorickettsia risticii str. Illinois, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_007798:652317*65231769011637800Neorickettsia sennetsu str. Miyayama, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_004757:230541*23054125274022200Nitrosomonas europaea ATCC 19718, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_009879:10354461035446106011424669Rickettsia canadensis str. McKiel, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_000963:995500995500102309927600Rickettsia prowazekii str. Madrid E, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_009882:11237091123709114614722439Rickettsia rickettsii str. 'Sheila Smith', complete genome2e-0765.9BLASTN svgBLASTP svg
NC_010263:11359321135932115460218671Rickettsia rickettsii str. Iowa, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_006142:994753*994753102179527043Rickettsia typhi str. Wilmington, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_019970:81391781391783706923153Thermoanaerobacterium thermosaccharolyticum M0795, complete genome4e-0867.9BLASTN svgBLASTP svg