Pre_GI: BLASTN Hits

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Query: NC_010161:2155500 Bartonella tribocorum CIP 105476, complete genome

Start: 2155500, End: 2199644, Length: 44145

Host Lineage: Bartonella tribocorum; Bartonella; Bartonellaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This organism was isolated from the blood of wild rats and from fleas obtained from wild rats. Transmission of these organisms is often through an insect vector. Once in a host, this intracellular pathogen is internalized by an actin-dependent mechanism, and primarily targets endothelial cells, although other cells can be infected. The proliferation of the vascular endothelium (bacillary angiomatosis) is characterisitic of Bartonella infection and results in multiplication of the bacterium's host cells. Infected macrophages are stimulated to release vascular endothelial growth factor (VEGF) and interleukin 1 beta, both of which promote angiogenesis. Endothelial cells are also stimulated to grow and divide by direct contact with bacterial cells. In addition, programmed cell death (apoptosis) of endothelial cells is inhibited, combatting a common mechanism eukaryotic cells use to deal with bacterial infection. Other pathogenicity factors include pili and outer membrane adhesins for attachment to host cells. This organism is genetically related to Bartonella elizabethae which was isolated from a case of endocarditis in a human.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_012846:2004711*2004711202983225122Bartonella grahamii as4aup, complete genome01546BLASTN svgBLASTP svg
NC_005956:1648000*1648000167344625447Bartonella henselae str. Houston-1, complete genome0882BLASTN svgBLASTP svg
NC_008783:177161*17716121209934939Bartonella bacilliformis KC583, complete genome3e-100375BLASTN svgBLASTP svg
NC_014932:1314881*1314881135142036540Bartonella clarridgeiae 73, complete genome1e-96363BLASTN svgBLASTP svg
NC_006932:266000*26600029059924600Brucella abortus biovar 1 str. 9-941 chromosome I, complete7e-33151BLASTN svgBLASTP svg
NC_007618:262415*26241528630723893Brucella melitensis biovar Abortus 2308 chromosome I, complete7e-33151BLASTN svgBLASTP svg
NC_010742:264433*26443328809923667Brucella abortus S19 chromosome 1, complete sequence7e-33151BLASTN svgBLASTP svg
NC_015857:265721*26572128968623966Brucella pinnipedialis B2/94 chromosome chromosome 1, complete7e-33151BLASTN svgBLASTP svg
NC_008686:1960034*1960034199164331610Paracoccus denitrificans PD1222 chromosome 1, complete sequence4e-28135BLASTN svgBLASTP svg
NC_016027:16471101647110169572448615Gluconacetobacter xylinus NBRC 3288, complete genome1e-22117BLASTN svgBLASTP svg
NC_009952:997950*997950102059922650Dinoroseobacter shibae DFL 12, complete genome6e-21111BLASTN svgBLASTP svg
NC_010161:21005002100500212209921600Bartonella tribocorum CIP 105476, complete genome2e-20109BLASTN svgBLASTP svg
NC_013209:2782500*2782500280575023251Acetobacter pasteurianus IFO 3283-01, complete genome2e-20109BLASTN svgBLASTP svg
NC_011757:5742290*5742290578349941210Methylobacterium chloromethanicum CM4, complete genome1e-19107BLASTN svgBLASTP svg
NC_010172:5447189*5447189548599938811Methylobacterium extorquens PA1, complete genome2e-18103BLASTN svgBLASTP svg
NC_008344:1899317*1899317192509925783Nitrosomonas eutropha C91, complete genome1e-1593.7BLASTN svgBLASTP svg
NC_004757:427483*42748347957952097Nitrosomonas europaea ATCC 19718, complete genome1e-1593.7BLASTN svgBLASTP svg
NC_005956:16168041616804163569618893Bartonella henselae str. Houston-1, complete genome9e-1487.7BLASTN svgBLASTP svg
NC_015731:867377*86737792057653200Nitrosomonas sp. Is79A3 chromosome, complete genome9e-1487.7BLASTN svgBLASTP svg
NC_010002:528529*52852955003421506Delftia acidovorans SPH-1, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_006348:2738425*2738425276209923675Burkholderia mallei ATCC 23344 chromosome 1, complete sequence2e-1179.8BLASTN svgBLASTP svg
NC_005070:1837051*1837051185722820178Synechococcus sp. WH 8102, complete genome9e-1177.8BLASTN svgBLASTP svg
NC_010120:2055803*2055803208173125929Neisseria meningitidis 053442, complete genome9e-1177.8BLASTN svgBLASTP svg
NC_014910:465980*46598050776541786Alicycliphilus denitrificans BC chromosome, complete genome9e-1177.8BLASTN svgBLASTP svg
NC_015593:2103815*2103815214825244438Sphingobium chlorophenolicum L-1 chromosome chromosome 1, complete9e-1177.8BLASTN svgBLASTP svg
NC_002927:5327094*5327094535399926906Bordetella bronchiseptica RB50, complete genome3e-1075.8BLASTN svgBLASTP svg
NC_010645:3720501*3720501374549924999Bordetella avium 197N, complete genome3e-1075.8BLASTN svgBLASTP svg
NC_015458:3077804*3077804310090323100Pusillimonas sp. T7-7 chromosome, complete genome3e-1075.8BLASTN svgBLASTP svg
NC_019814:125611*12561117345647846Candidatus Kinetoplastibacterium blastocrithidii (ex Strigomonas3e-1075.8BLASTN svgBLASTP svg
NC_019815:589762*58976263168441923Candidatus Kinetoplastibacterium crithidii (ex Angomonas deanei3e-1075.8BLASTN svgBLASTP svg
NC_020299:764526*76452681749952974Candidatus Kinetoplastibacterium oncopeltii TCC290E, complete3e-1075.8BLASTN svgBLASTP svg
NC_009840:396319*39631942044724129Prochlorococcus marinus str. MIT 9215, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_008817:387408*38740841041423007Prochlorococcus marinus str. MIT 9515, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_008816:369074*36907439418325110Prochlorococcus marinus str. AS9601, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_007577:353755*35375537886925115Prochlorococcus marinus str. MIT 9312, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_003912:472000*47200049506923070Campylobacter jejuni RM1221, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_014909:219498*21949824042420927Candidatus Blochmannia vafer str. BVAF chromosome, complete genome5e-0971.9BLASTN svgBLASTP svg
NC_019960:260997*26099728725926263Prevotella dentalis DSM 3688 chromosome 1, complete sequence8e-0867.9BLASTN svgBLASTP svg
NC_006570:141966*14196617413932174Francisella tularensis subsp. tularensis Schu 4, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_008245:141982*14198217415532174Francisella tularensis subsp. tularensis FSC 198, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_008601:1658454*1658454167712618673Francisella tularensis subsp. novicida U112, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_009662:222964*22296426489641933Nitratiruptor sp. SB155-2, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_010677:214712*21471224609931388Francisella tularensis subsp. mediasiatica FSC147, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_020054:1335699*1335699135810022402Fibrella aestuarina BUZ 2 drat genome3e-0765.9BLASTN svgBLASTP svg
NC_015696:610000*61000065257442575Francisella sp. TX077308 chromosome, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_015144:734726*73472676451229787Weeksella virosa DSM 16922 chromosome, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_010336:1117325*1117325114783030506Francisella philomiragia subsp. philomiragia ATCC 25017, complete1e-0663.9BLASTN svgBLASTP svg
NC_013454:168463*16846319120322741Blattabacterium sp. (Blattella germanica) str. Bge, complete5e-0661.9BLASTN svgBLASTP svg
NC_013061:987744*987744100953721794Pedobacter heparinus DSM 2366, complete genome5e-0661.9BLASTN svgBLASTP svg