Pre_GI: BLASTN Hits

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Query: NC_010161:2100500 Bartonella tribocorum CIP 105476, complete genome

Start: 2100500, End: 2122099, Length: 21600

Host Lineage: Bartonella tribocorum; Bartonella; Bartonellaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This organism was isolated from the blood of wild rats and from fleas obtained from wild rats. Transmission of these organisms is often through an insect vector. Once in a host, this intracellular pathogen is internalized by an actin-dependent mechanism, and primarily targets endothelial cells, although other cells can be infected. The proliferation of the vascular endothelium (bacillary angiomatosis) is characterisitic of Bartonella infection and results in multiplication of the bacterium's host cells. Infected macrophages are stimulated to release vascular endothelial growth factor (VEGF) and interleukin 1 beta, both of which promote angiogenesis. Endothelial cells are also stimulated to grow and divide by direct contact with bacterial cells. In addition, programmed cell death (apoptosis) of endothelial cells is inhibited, combatting a common mechanism eukaryotic cells use to deal with bacterial infection. Other pathogenicity factors include pili and outer membrane adhesins for attachment to host cells. This organism is genetically related to Bartonella elizabethae which was isolated from a case of endocarditis in a human.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_005956:16168041616804163569618893Bartonella henselae str. Houston-1, complete genome01748BLASTN svgBLASTP svg
NC_014932:1314881*1314881135142036540Bartonella clarridgeiae 73, complete genome0759BLASTN svgBLASTP svg
NC_020301:1449616*1449616147209922484Bartonella vinsonii subsp. berkhoffii str. Winnie, complete genome3e-49204BLASTN svgBLASTP svg
NC_010161:2155500*2155500219964444145Bartonella tribocorum CIP 105476, complete genome3e-21111BLASTN svgBLASTP svg
NC_007412:14775714775717525527499Anabaena variabilis ATCC 29413 plasmid C, complete sequence1e-1489.7BLASTN svgBLASTP svg
NC_007798:80500*8050010364023141Neorickettsia sennetsu str. Miyayama, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_004578:895019*89501992169226674Pseudomonas syringae pv. tomato str. DC3000, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_020050:41342641342644399930574Cylindrospermum stagnale PCC 7417 plasmid pCYLST.01, partial4e-1177.8BLASTN svgBLASTP svg
NC_020050:112538625386Cylindrospermum stagnale PCC 7417 plasmid pCYLST.01, partial4e-1177.8BLASTN svgBLASTP svg
CP002185:2889656*2889656291209922444Escherichia coli W, complete genome7e-1073.8BLASTN svgBLASTP svg
CP002516:1196000*1196000121818122182Escherichia coli KO11, complete genome7e-1073.8BLASTN svgBLASTP svg
CU928160:2785792*2785792280821622425Escherichia coli IAI1 chromosome, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_012416:205925*20592522897023046Wolbachia sp. wRi, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_002978:20087820087822003219155Wolbachia endosymbiont of Drosophila melanogaster, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_006905:2805877*2805877282870222826Salmonella enterica subsp. enterica serovar Choleraesuis str1e-0869.9BLASTN svgBLASTP svg
NC_014002:403180*40318042237819199Methanohalophilus mahii DSM 5219 chromosome, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_003317:190975*19097521627025296Brucella melitensis 16M chromosome I, complete sequence2e-0765.9BLASTN svgBLASTP svg
NC_004310:1777721*1777721180601328293Brucella suis 1330 chromosome I, complete sequence2e-0765.9BLASTN svgBLASTP svg
NC_006932:1795500*1795500182178126282Brucella abortus biovar 1 str. 9-941 chromosome I, complete2e-0765.9BLASTN svgBLASTP svg
NC_007618:1792500*1792500182000027501Brucella melitensis biovar Abortus 2308 chromosome I, complete2e-0765.9BLASTN svgBLASTP svg
NC_010103:1777000*1777000180418827189Brucella canis ATCC 23365 chromosome I, complete sequence2e-0765.9BLASTN svgBLASTP svg
NC_010169:1599936*1599936162443724502Brucella suis ATCC 23445 chromosome I, complete sequence2e-0765.9BLASTN svgBLASTP svg
NC_010742:1794000*1794000181909925100Brucella abortus S19 chromosome 1, complete sequence2e-0765.9BLASTN svgBLASTP svg
NC_013960:23669102366910239222125312Nitrosococcus halophilus Nc4 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_015857:1809500*1809500183566226163Brucella pinnipedialis B2/94 chromosome chromosome 1, complete2e-0765.9BLASTN svgBLASTP svg
NC_009053:12573021257302128078923488Actinobacillus pleuropneumoniae L20, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_008343:2020785*2020785204163920855Granulibacter bethesdensis CGDNIH1, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_008044:136844*13684416509628253Silicibacter sp. TM1040, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_006155:17560001756000179467638677Yersinia pseudotuberculosis IP 32953, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_000911:2043938*2043938206580821871Synechocystis sp. PCC 6803, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_009667:1076718*1076718109886222145Ochrobactrum anthropi ATCC 49188 chromosome 1, complete sequence6e-0763.9BLASTN svgBLASTP svg
NC_010634:17555481755548179542439877Yersinia pseudotuberculosis PB1/+, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_018704:81733*8173311606034328Amphibacillus xylanus NBRC 15112, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_013722:75147375147377584224370Xanthomonas albilineans, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_012925:1776450*1776450179459918150Streptococcus suis P1/7, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_012563:519037*51903754582126785Clostridium botulinum A2 str. Kyoto, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_011899:86800*8680011300826209Halothermothrix orenii H 168, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_005061:214168*21416823856824401Candidatus Blochmannia floridanus, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_007514:1936812*1936812195709920288Chlorobium chlorochromatii CaD3, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_007761:3962474*3962474398568423211Rhizobium etli CFN 42, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_010994:4071131*4071131409424623116Rhizobium etli CIAT 652, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_011080:2789744*2789744281281123068Salmonella enterica subsp. enterica serovar Newport str. SL254,3e-0661.9BLASTN svgBLASTP svg
NC_011149:2701916*2701916272409922184Salmonella enterica subsp. enterica serovar Agona str. SL483,3e-0661.9BLASTN svgBLASTP svg
NC_015470:71550071550073444818949Chlamydophila psittaci 6BC chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_020248:70802470802472691918896Chlamydophila psittaci Mat116, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_003198:2703013*2703013272616623154Salmonella enterica subsp. enterica serovar Typhi str. CT18,3e-0661.9BLASTN svgBLASTP svg