Pre_GI: BLASTP Hits

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Query: NC_010117:700112:700112 Coxiella burnetii RSA 331, complete genome

Start: 700112, End: 701692, Length: 1581

Host Lineage: Coxiella burnetii; Coxiella; Coxiellaceae; Legionellales; Proteobacteria; Bacteria

General Information: This strain (RSA 331; Hentzerling) is associated with acute Q fever and was isolated from the blood of an infected patient in northern Italy in 1945. This organism is widely distributed in nature and can cause infections in reptiles, birds, and mammals. It causes Q fever, or 'query' fever, an atypical pneumonia first associated with abattoir workers in Australia. Transmission may be through insect vectors such as ticks that have bitten an infected wild or domesticated animal, or through an aerosol produced by domesticated animals such as sheep or cattle. The presence of a plasmid is believed to be associated with virulence and pathogenicity, however C. burnetii isolates containing plasmid QpDG are avirulent in guinea pigs and plasmidless isolates have been associated with endocarditis in humans. Coxiella burnetii has a developmental life cycle, and can grow vegetatively through binary fission, or asymmetrically and produce a spore-like cell. The spore-like cell may enable the organism to exist extracellularly for small amounts of time. This bacterium is an obligate intracellular pathogen. It is endocytosed by a host cell, a macrophage for example, and lives and replicates inside the phagolysozome, a unique property of this organism. The genome encodes proteins that have a higher than average pI, which may enable adaptation to the acidic environment of the phagolysozome. The chromosome also contains genes for a number of detoxification and stress response proteins such as dismutases that allow growth in the oxidative environment. The type IV system is similar to the one found in Legionella, which may be important for intracellular survival. This organism produces numerous ankyrin-repeat proteins that may be involved in interactions with the host cell. The genome has 83 pseudogenes, which may be a result of the typical genome-wide degradation observed with other intracellular organisms and also has a group I intron in the 23S ribosomal RNA gene.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_002971:619355:6193556193556209351581Coxiella burnetii RSA 493, complete genomeADP-heptose synthase, putative01023
NC_008820:91967:99327993271008381512Prochlorococcus marinus str. MIT 9303, complete genomeputative ADP-heptose synthase5e-57222
NC_018645:4104302:4107882410788241093631482Desulfobacula toluolica Tol2, complete genomecytidyltransferase domain modulated carbohydrate/purine kinase1e-54214
NC_008816:1206070:1226714122671412282191506Prochlorococcus marinus str. AS9601, complete genomeputative ADP-heptose synthase1e-53211
NC_009445:5357979:5374471537447153759731503Bradyrhizobium sp. ORS 278 chromosome, complete genomebifunctional enzyme (sugar kinase/cytidylyltransferase)3e-48193
NC_007626:68925:6892568925704811557Magnetospirillum magneticum AMB-1, complete genomeADP-heptose synthase3e-47189
NC_012881:964823:9772669772669788881623Desulfovibrio salexigens DSM 2638, complete genomecytidyltransferase-related domain protein2e-46187
NC_012440:373863:389289389289390242954Persephonella marina EX-H1, complete genomebifunctional protein RfaE, domain I4e-1893.2
NC_007498:1491223:1503604150360415050761473Pelobacter carbinolicus DSM 2380, complete genomeputative ADP-heptose synthase5e-1893.2
NC_003454:249304:266910266910267881972Fusobacterium nucleatum subsp. nucleatum ATCC 25586, completeADP-heptose synthase2e-1790.5
NC_011979:2352961:2352961235296123544241464Geobacter sp. FRC-32, complete genomerfaE bifunctional protein4e-1790.1
NC_014206:2516000:254592725459272546820894Geobacillus sp. C56-T3 chromosome, complete genomecytidyltransferase-related domain-containing protein6e-1789.4
NC_014632:1914500:193957919395791940565987Ilyobacter polytropus DSM 2926 chromosome, complete genomerfaE bifunctional protein1e-1688.2
NC_015318:1455444:147101314710131471948936Hippea maritima DSM 10411 chromosome, complete genomerfaE bifunctional protein2e-1687.4
NC_008312:5386630:5387910538791053889921083Trichodesmium erythraeum IMS101, complete genomerfaE bifunctional protein8e-1685.5
NC_019892:7822000:7823273782327378248291557Singulisphaera acidiphila DSM 18658 chromosome, complete genomeD-heptose-1-phosphate adenylyltransferase1e-1584.7
NC_012039:412837:4545624545624559351374Campylobacter lari RM2100, complete genomeD,D-heptose 1-phosphate adenosyltransferase/7-phosphate kinase5e-1582.8
NC_014759:2099623:211951221195122120507996Marivirga tractuosa DSM 4126 chromosome, complete genomepfkb domain protein1e-1481.6
NC_016629:1175828:1183505118350511845841080Desulfovibrio africanus str. Walvis Bay chromosome, completerfaE bifunctional protein1e-1378.6
NC_015381:4070968:408571640857164086192477Burkholderia gladioli BSR3 chromosome 1, complete sequencePutative cytidylyltransferase2e-1378.2
NC_014632:1514500:152816315281631528699537Ilyobacter polytropus DSM 2926 chromosome, complete genomerfaE bifunctional protein2e-1378.2
NC_009445:5388822:5413717541371754151891473Bradyrhizobium sp. ORS 278 chromosome, complete genomebifunctional protein RfaE (involved in ADP-L-glycero-D-manno-heptose synthesis) kinase/sugar nucleotide transferase3e-1377
NC_012108:2037429:204066320406632041169507Desulfobacterium autotrophicum HRM2, complete genomeputative ADP-heptose synthase5e-1376.3
NC_015177:1476073:1486519148651914880001482Pedobacter saltans DSM 12145 chromosome, complete genomecytidyltransferase-related domain protein5e-1376.3
NC_016612:627118:6397536397536411861434Klebsiella oxytoca KCTC 1686 chromosome, complete genomebifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase6e-1376.3
NC_017068:2786391:280649228064922807469978Selenomonas ruminantium subsp. lactilytica TAM6421, completeputative D-beta-D-heptose 7-phosphate kinase1e-1275.1
NC_007947:797456:8087818087818102471467Methylobacillus flagellatus KT, complete genomeRfaE bifunctional protein, domain I1e-1274.7
NC_014507:1403000:141127214112721412249978Methanoplanus petrolearius DSM 11571 chromosome, complete genomePfkB domain-containing protein2e-1274.7
NC_011026:2269986:230750023075002308006507Chloroherpeton thalassium ATCC 35110, complete genomerfaE bifunctional protein3e-1273.9
NC_008639:378181:382706382706383263558Chlorobium phaeobacteroides DSM 266, complete genomerfaE bifunctional protein3e-1273.6
NC_011027:1971580:200200120020012002504504Chlorobaculum parvum NCIB 8327, complete genomerfaE bifunctional protein3e-1273.6
NC_009801:3511444:3525004352500435264371434Escherichia coli E24377A, complete genomebifunctional protein HldE5e-1272.8
NC_010473:3273882:3291087329108732925201434Escherichia coli str. K-12 substr. DH10B, complete genomefused heptose 7-phosphate kinase and heptose 1-phosphate adenyltransferase5e-1272.8
CP002516:693703:6965916965916980241434Escherichia coli KO11, complete genomerfaE bifunctional protein5e-1272.8
NC_011750:3683760:3699627369962737010601434Escherichia coli IAI39 chromosome, complete genomebifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase5e-1272.8
AP010958:3787991:3806380380638038078131434Escherichia coli O103:H2 str. 12009 DNA, complete genomefused heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase5e-1272.8
NC_010468:694943:6991556991557005881434Escherichia coli ATCC 8739, complete genomerfaE bifunctional protein5e-1272.8
CU928160:3263248:3276808327680832782411434Escherichia coli IAI1 chromosome, complete genomefused heptose 7-phosphate kinase ; heptose 1-phosphate adenyltransferase5e-1272.8
CP002185:3393813:3408051340805134094841434Escherichia coli W, complete genomefused heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase5e-1272.8
NC_009800:3224575:3238709323870932401421434Escherichia coli HS, complete genomebifunctional protein HldE6e-1272.8
NC_016822:3485631:3502652350265235040851434Shigella sonnei 53G, complete genomebifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase6e-1272.8
NC_011745:3627438:3644399364439936458321434Escherichia coli ED1a chromosome, complete genomebifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase6e-1272.8
CU928145:3529930:3544071354407135455041434Escherichia coli 55989 chromosome, complete genomefused heptose 7-phosphate kinase ; heptose 1-phosphate adenyltransferase5e-1272.8
AC_000091:3180275:3193976319397631954091434Escherichia coli W3110 DNA, complete genomefused heptose 7-phosphate kinase and heptose 1-phosphate adenyltransferase5e-1272.8
NC_016902:693703:6965916965916980241434Escherichia coli KO11FL chromosome, complete genomerfaE bifunctional protein5e-1272.8
NC_013364:3840000:3855947385594738573801434Escherichia coli O111:H- str. 11128, complete genomefused heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase5e-1272.8
NC_013361:4102894:4117132411713241185651434Escherichia coli O26:H11 str. 11368 chromosome, complete genomebifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase5e-1272.8
NC_013353:3787991:3806380380638038078131434Escherichia coli O103:H2 str. 12009, complete genomefused heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase5e-1272.8
NC_012967:3113768:3128154312815431295871434Escherichia coli B str. REL606 chromosome, complete genomebifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase5e-1272.8
NC_012947:708064:7109527109527123851434Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completebifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase5e-1272.8
NC_012759:3063285:3080490308049030819231434Escherichia coli BW2952 chromosome, complete genomebifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase5e-1272.8
NC_011741:3263248:3276808327680832782411434Escherichia coli IAI1 chromosome, complete genomebifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase5e-1272.8
NC_011415:3443851:3458088345808834595211434Escherichia coli SE11 chromosome, complete genomebifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase5e-1272.8
NC_011748:3529930:3544071354407135455041434Escherichia coli 55989, complete genomebifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase5e-1272.8
NC_000913:3176000:3193342319334231947751434Escherichia coli K12, complete genomefused heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase5e-1272.8
NC_012489:1874415:187955218795521880040489Gemmatimonas aurantiaca T-27, complete genomeD-beta-D-heptose 1-phosphate adenosyltransferase7e-1272.4
NC_012225:787737:807332807332807793462Brachyspira hyodysenteriae WA1, complete genomeputative RfaE, ADP-heptose synthase1e-1172
NC_012440:1841315:184666818466681847123456Persephonella marina EX-H1, complete genomebifunctional protein RfaE, domain II5e-1169.7
NC_015437:438538:442296442296443294999Selenomonas sputigena ATCC 35185 chromosome, complete genomerfaE bifunctional protein5e-1169.7
NC_013192:305478:324188324188324682495Leptotrichia buccalis DSM 1135, complete genomerfaE bifunctional protein6e-1169.3
NC_005061:65861:6818568185696241440Candidatus Blochmannia floridanus, complete genomeADP-heptose synthase1e-1068.2
NC_012225:2198987:2220322222032222213291008Brachyspira hyodysenteriae WA1, complete genomeADP-heptose synthase2e-1067.4
NC_010803:301753:306305306305306808504Chlorobium limicola DSM 245, complete genomerfaE bifunctional protein3e-1067
NC_000907:1568867:1595753159575315971831431Haemophilus influenzae Rd KW20, complete genomeADP-heptose synthase4e-1066.6
NC_002932:221661:226171226171226668498Chlorobium tepidum TLS, complete genomecytidylyltransferase family protein1e-0965.1
NC_015554:817500:8179498179498193791431Alteromonas sp. SN2 chromosome, complete genomebifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase2e-0964.7
NC_015410:709947:7248167248167262371422Pseudomonas mendocina NK-01 chromosome, complete genomebifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase2e-0964.3
NC_015437:438538:439564439564440028465Selenomonas sputigena ATCC 35185 chromosome, complete genomerfaE bifunctional protein2e-0964.3
NC_017514:96911:120122120122120628507Neisseria meningitidis M01-240149 chromosome, complete genomehldE bifunctional protein, domain II3e-0963.9
NC_009439:637193:6566856566856581061422Pseudomonas mendocina ymp, complete genomebifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase3e-0963.9
NC_015556:4543380:4545300454530045467211422Pseudomonas fulva 12-X chromosome, complete genomeBifunctional protein hldE5e-0963.2
NC_013416:1588369:1595352159535215967821431Aggregatibacter actinomycetemcomitans D11S-1, complete genomebifunctional protein HldE6e-0962.8
NC_016513:1924242:1931282193128219327121431Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completebifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase7e-0962.4
NC_012483:848750:8499298499298513621434Acidobacterium capsulatum ATCC 51196, complete genomelipopolysaccharide core biosynthesis protein1e-0862
NC_014820:71565:102510102510103118609Cenarchaeum symbiosum A, complete genomecytidylyltransferase3e-0860.5
NC_008740:876115:8898928898928913371446Marinobacter aquaeolei VT8, complete genomerfaE bifunctional protein4e-0860.1
NC_015437:438538:4385384385384395451008Selenomonas sputigena ATCC 35185 chromosome, complete genomePfkB domain protein5e-0859.7
NC_010085:1174917:118824311882431188863621Nitrosopumilus maritimus SCM1, complete genomecytidyltransferase-related domain1e-0758.5
NC_015636:1061736:107623310762331076682450Methanothermococcus okinawensis IH1 chromosome, complete genomecytidyltransferase-related domain-containing protein2e-0654.3
NC_015636:14000:352473524736155909Methanothermococcus okinawensis IH1 chromosome, complete genomePfkB domain-containing protein3e-0653.9
NC_013156:127000:143640143640144092453Methanocaldococcus fervens AG86, complete genomecytidyltransferase-related domain protein3e-0653.5
NC_015320:790137:794759794759795250492Archaeoglobus veneficus SNP6 chromosome, complete genomecytidyltransferase-related domain-containing protein7e-0652.8