Pre_GI: BLASTP Hits

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Query: NC_010102:931055:931055 Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,

Start: 931055, End: 933109, Length: 2055

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (SGSC 4150; ATCC BAA-1250) was isolated from a stool sample of an infected woman in Penang, Malaysia, May 16, 2002. This strain is susceptible to antibiotics, and was classified as serovar Paratyphi B because it was unable to metabolize D-tartrate. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011205:1107998:1108709110870911107632055Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein01250
NC_009436:1141376:1143916114391611457361821Enterobacter sp. 638, complete genomehypothetical protein0765
NC_011741:2715246:2733928273392827359342007Escherichia coli IAI1 chromosome, complete genomehypothetical protein2e-1378.6
CU928160:2715246:2733928273392827359342007Escherichia coli IAI1 chromosome, complete genomeconserved hypothetical protein from bacteriophage origin2e-1378.6
NC_014931:2929695:2949697294969729525102814Variovorax paradoxus EPS chromosome, complete genomephage-like protein8e-1376.3
NC_014931:2949697:2949697294969729525102814Variovorax paradoxus EPS chromosome, complete genomephage-like protein8e-1376.3
NC_007712:1997010:1997010199701019995412532Sodalis glossinidius str. 'morsitans', complete genomehypothetical protein4e-1273.9
NC_006155:1756000:1792928179292817946761749Yersinia pseudotuberculosis IP 32953, complete genomepossible LysM domain7e-0963.2
NC_010634:1755548:1793159179315917949071749Yersinia pseudotuberculosis PB1/+, complete genomepeptidoglycan-binding LysM7e-0963.2
NC_011601:2806392:2824180282418028266902511Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomehypothetical protein1e-0862.4
NC_009708:915814:950262950262951074813Yersinia pseudotuberculosis IP 31758 chromosome, complete genomehypothetical protein9e-0859.3
NC_007626:418067:423624423624424067444Magnetospirillum magneticum AMB-1, complete genomehypothetical protein1e-0759.3
NC_004129:4333302:434183843418384342413576Pseudomonas fluorescens Pf-5, complete genomestructural protein P5, putative2e-0758.5
NC_011769:2016000:203904220390422039449408Desulfovibrio vulgaris str. 'Miyazaki F', complete genomehypothetical protein9e-0755.8
NC_012751:899394:9077959077959096841890Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum), completehypothetical protein1e-0655.8
NC_002937:1764117:180025918002591800675417Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, completehypothetical protein3e-0654.3
NC_013892:671000:690482690482690883402Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein3e-0654.3
NC_013892:2005480:200881320088132009214402Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein4e-0653.9
NC_012962:4942000:495029849502984950693396Photorhabdus asymbiotica, complete genomesimilarities with phage structural protein p56e-0653.1