Pre_GI: BLASTP Hits

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Query: NC_010102:4557037:4573688 Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,

Start: 4573688, End: 4574233, Length: 546

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (SGSC 4150; ATCC BAA-1250) was isolated from a stool sample of an infected woman in Penang, Malaysia, May 16, 2002. This strain is susceptible to antibiotics, and was classified as serovar Paratyphi B because it was unable to metabolize D-tartrate. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014121:489500:518593518593519129537Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completehypothetical protein4e-47187
NC_016816:4129299:413411441341144134668555Pantoea ananatis LMG 5342, complete genomehypothetical protein6e-37153
NC_015567:313035:318704318704319279576Serratia sp. AS9 chromosome, complete genomehypothetical protein2e-22105
NC_015566:316340:318539318539319114576Serratia sp. AS12 chromosome, complete genomehypothetical protein2e-22105
NC_009832:358291:363939363939364514576Serratia proteamaculans 568, complete genomehypothetical protein2e-21102
NC_014029:331919:353420353420353995576Yersinia pestis Z176003 chromosome, complete genomehypothetical protein3e-21101
NC_012779:346998:360501360501360998498Edwardsiella ictaluri 93-146, complete genomehypothetical protein9e-1993.2
NC_014029:331919:384018384018384575558Yersinia pestis Z176003 chromosome, complete genomehypothetical protein2e-1892
NC_010554:2872000:287642928764292876965537Proteus mirabilis HI4320, complete genomelipoprotein3e-1684.7
NC_016816:792460:800089800089800535447Pantoea ananatis LMG 5342, complete genomehypothetical protein2e-1582
NC_013956:3641368:366397236639723664418447Pantoea ananatis LMG 20103 chromosome, complete genomehypothetical protein2e-1582