Pre_GI: BLASTP Hits

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Query: NC_010102:4477836:4497163 Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,

Start: 4497163, End: 4497942, Length: 780

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (SGSC 4150; ATCC BAA-1250) was isolated from a stool sample of an infected woman in Penang, Malaysia, May 16, 2002. This strain is susceptible to antibiotics, and was classified as serovar Paratyphi B because it was unable to metabolize D-tartrate. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014121:398012:420610420610421353744Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completehypothetical protein5e-97353
NC_016816:4232680:423336142333614234104744Pantoea ananatis LMG 5342, complete genomehypothetical protein2e-88325
NC_016832:4368948:438617443861744386896723Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein8e-44177
NC_012125:4481808:450147945014794502159681Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein8e-40164
NC_009832:4564752:456702845670284567747720Serratia proteamaculans 568, complete genomehypothetical protein2e-35149
NC_004547:611178:621156621156621848693Erwinia carotovora subsp. atroseptica SCRI1043, complete genomehypothetical protein5e-34144
NC_015567:313035:314780314780315496717Serratia sp. AS9 chromosome, complete genomehypothetical protein1e-33143
NC_004631:4381724:439909143990914399672582Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein2e-32139
NC_003198:4397074:441444144144414415022582Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein2e-32139
NC_014029:331919:349287349287350003717Yersinia pestis Z176003 chromosome, complete genomehypothetical protein2e-32139
NC_012779:305969:324506324506325228723Edwardsiella ictaluri 93-146, complete genomehypothetical protein3e-32138
NC_013421:701005:736693736693737391699Pectobacterium wasabiae WPP163, complete genomehypothetical protein1e-29129
NC_012691:779826:801775801775802461687Tolumonas auensis DSM 9187, complete genomehypothetical protein1e-23110
NC_011750:1978801:200340720034072004126720Escherichia coli IAI39 chromosome, complete genomehypothetical protein2e-21103
NC_002940:78392:792317923179968738Haemophilus ducreyi 35000HP, complete genomehypothetical protein2e-1996.3
NC_009832:358291:360027360027360572546Serratia proteamaculans 568, complete genomehypothetical protein4e-1995.1
NC_014562:983398:991368991368992093726Pantoea vagans C9-1 chromosome, complete genomehypothetical protein9e-1890.9
NC_009705:78000:929879298793670684Yersinia pseudotuberculosis IP 31758 plasmid_153kb, completehypothetical protein3e-1582.4
NC_018080:5091772:509999150999915100692702Pseudomonas aeruginosa DK2 chromosome, complete genomehypothetical protein4e-1271.6
NC_008463:5246954:525450852545085255209702Pseudomonas aeruginosa UCBPP-PA14, complete genomehypothetical protein2e-1169.7
NC_009656:4527457:457678245767824577483702Pseudomonas aeruginosa PA7 chromosome, complete genomehypothetical protein3e-1169.3
NC_004129:5373886:538118153811815381870690Pseudomonas fluorescens Pf-5, complete genomehypothetical protein4e-1065.1