Pre_GI: BLASTP Hits

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Query: NC_010102:4477836:4489185 Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,

Start: 4489185, End: 4490102, Length: 918

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (SGSC 4150; ATCC BAA-1250) was isolated from a stool sample of an infected woman in Penang, Malaysia, May 16, 2002. This strain is susceptible to antibiotics, and was classified as serovar Paratyphi B because it was unable to metabolize D-tartrate. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011149:4474012:448510844851084486025918Salmonella enterica subsp. enterica serovar Agona str. SL483,putative periplasmic protein1e-164578
NC_012125:4481808:449299844929984493915918Salmonella enterica subsp. enterica serovar Paratyphi C strainperiplasmic protein2e-164578
NC_006905:4486433:449755444975544498540987Salmonella enterica subsp. enterica serovar Choleraesuis strputative periplasmic protein3e-164577
NC_011083:4547825:4558804455880445598051002Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,putative periplasmic protein5e-164577