Pre_GI: BLASTP Hits

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Query: NC_010102:4477836:4488075 Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,

Start: 4488075, End: 4488179, Length: 105

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (SGSC 4150; ATCC BAA-1250) was isolated from a stool sample of an infected woman in Penang, Malaysia, May 16, 2002. This strain is susceptible to antibiotics, and was classified as serovar Paratyphi B because it was unable to metabolize D-tartrate. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009801:3013838:302647430264743026773300Escherichia coli E24377A, complete genomeIS3, transposase orfA6e-0856.2
NC_011205:371001:373211373211373510300Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853IS3 transposase OrfA7e-0855.8
NC_011294:346915:349125349125349433309Salmonella enterica subsp. enterica serovar Enteritidis strIS3 transposase7e-0855.8
NC_003197:2894344:291068129106812910980300Salmonella typhimurium LT2, complete genomeputative transposase8e-0855.8
NC_004337:1065609:107037510703751070683309Shigella flexneri 2a str. 301, complete genomeIS3 ORF18e-0855.8
NC_011083:2847318:288518728851872885486300Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,IS3, transposase orfA8e-0855.8
NC_016856:2896630:293091629309162931215300Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative transposase8e-0855.8
NC_016860:2917910:293424729342472934546300Salmonella enterica subsp. enterica serovar Typhimurium strIS3 transposase OrfA8e-0855.8
NC_016863:2844883:287916928791692879468300Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative transposase8e-0855.8
NC_017328:1075535:108030210803021080610309Shigella flexneri 2002017 chromosome, complete genomeTransposase insE for insertion sequence IS38e-0855.8
AC_000091:303719:314506314506314814309Escherichia coli W3110 DNA, complete genomeIS3 element protein9e-0855.5
CU928160:2091249:211413321141332114441309Escherichia coli IAI1 chromosome, complete genomeIS3 element protein InsE9e-0855.5
NC_011741:2091249:211413321141332114441309Escherichia coli IAI1 chromosome, complete genomeIS3 element protein InsE9e-0855.5
NC_012759:461680:468816468816469124309Escherichia coli BW2952 chromosome, complete genomeIS3 element protein InsE9e-0855.5
NC_012967:1593101:160797316079731608281309Escherichia coli B str. REL606 chromosome, complete genomeputative transposase-related protein9e-0855.5
NC_013361:3651150:366554436655443665852309Escherichia coli O26:H11 str. 11368 chromosome, complete genomeIS3 transposase InsE9e-0855.5
NC_017328:1075535:109536110953611095669309Shigella flexneri 2002017 chromosome, complete genomeTransposase insE for insertion sequence IS39e-0855.5
NC_010473:498252:505388505388505696309Escherichia coli str. K-12 substr. DH10B, complete genomeDLP12 prophage; IS3 element protein InsE9e-0855.5
NC_000913:303719:314506314506314814309Escherichia coli K12, complete genomeIS3 element protein InsE9e-0855.5
CU928159:30700:350133501335321309Escherichia coli str. 55989 plasmid 55989p, complete genometransposase ORF A, IS39e-0855.5
NC_010473:279948:290056290056290364309Escherichia coli str. K-12 substr. DH10B, complete genomeIS3 element protein InsE9e-0855.5
NC_004337:3049118:310187431018743102182309Shigella flexneri 2a str. 301, complete genomeIS3 ORF19e-0855.5
NC_000913:558920:566056566056566364309Escherichia coli K12, complete genomeDLP12 prophage; IS3 element protein InsE9e-0855.5
NC_000913:1087062:109436110943611094669309Escherichia coli K12, complete genomeIS3 element protein InsE9e-0855.5
AC_000091:1083798:109556010955601095868309Escherichia coli W3110 DNA, complete genomeIS3 element protein9e-0855.5
AC_000091:558920:566056566056566364309Escherichia coli W3110 DNA, complete genomeIS3 element protein InsE9e-0855.5
NC_004337:2747917:275694827569482757256309Shigella flexneri 2a str. 301, complete genomeIS3 ORF19e-0855.5
NC_017328:2785309:279583027958302796138309Shigella flexneri 2002017 chromosome, complete genomeputative transposase9e-0855.5
NC_017328:3088907:314024131402413140549309Shigella flexneri 2002017 chromosome, complete genomeputative transposase9e-0855.5
NC_011740:2859933:286053528605352860843309Escherichia fergusonii ATCC 35469, complete genomeIS3 element protein InsE9e-0855.8
NC_016902:44744:518715187152170300Escherichia coli KO11FL chromosome, complete genometransposase IS3/IS911 family protein9e-0855.5
NC_016902:1165726:117226511722651172564300Escherichia coli KO11FL chromosome, complete genometransposase IS3/IS911 family protein9e-0855.5
NC_013364:3701895:371979737197973720096300Escherichia coli O111:H- str. 11128, complete genomeputative IS3 transposase InsE9e-0855.5
NC_012947:2189533:219508821950882195387300Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completetransposase IS3/IS911 family protein9e-0855.5
NC_011415:3006794:302119430211943021493300Escherichia coli SE11 chromosome, complete genometransposase9e-0855.5
CP002516:1165726:117226511722651172564300Escherichia coli KO11, complete genometransposase IS3/IS911 family protein9e-0855.5
CP002185:2919752:293329329332932933592300Escherichia coli W, complete genomeIS3 Transposase ORF19e-0855.5
NC_009801:1756610:176914817691481769447300Escherichia coli E24377A, complete genomeIS3, transposase orfA9e-0855.5
NC_004741:2741971:275158927515892751888300Shigella flexneri 2a str. 2457T, complete genomeIS3 orfA9e-0855.5
NC_004741:3041294:309137230913723091671300Shigella flexneri 2a str. 2457T, complete genomeIS3 orfA9e-0855.5
CP002185:4035502:405390340539034054202300Escherichia coli W, complete genomeIS3 Transposase ORF19e-0855.5
NC_008258:1076922:108975510897551090054300Shigella flexneri 5 str. 8401, complete genomeIS3 ORF19e-0855.5
NC_013716:5201097:523539852353985235697300Citrobacter rodentium ICC168, complete genomeIS3 transposase A9e-0855.5
NC_008258:2905413:291201129120112912310300Shigella flexneri 5 str. 8401, complete genomeIS3 ORF19e-0855.5
NC_010468:2809125:281429428142942814593300Escherichia coli ATCC 8739, complete genometransposase IS3/IS911 family protein9e-0855.5
CP002516:44744:518715187152170300Escherichia coli KO11, complete genometransposase IS3/IS911 family protein9e-0855.5
NC_011294:1085447:111278411127841113092309Salmonella enterica subsp. enterica serovar Enteritidis strtransposase1e-0755.1
NC_011205:1227373:123612212361221236421300Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853IS3 OrfA1e-0755.1
NC_011274:1129686:114949211494921149791300Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91transposase1e-0755.1
NC_016831:1865681:187537318753731875672300Salmonella enterica subsp. enterica serovar Gallinarum/pullorumputative transposase1e-0755.1
NC_010468:4059436:406932040693204069619300Escherichia coli ATCC 8739, complete genometransposase IS3/IS911 family protein1e-0755.5
NC_011149:1110642:112229411222941122593300Salmonella enterica subsp. enterica serovar Agona str. SL483,IS3 OrfA8e-0752.4
NC_020064:1409596:142149714214971421796300Serratia marcescens FGI94, complete genomeTransposase2e-0651.2
NC_020064:3998715:406525240652524065551300Serratia marcescens FGI94, complete genomeTransposase2e-0650.8
NC_012214:1355500:137029913702991370598300Erwinia pyrifoliae Ep1/96, complete genomeTransposase, probable orf B4e-0650.1
NC_012214:1650523:166992116699211670220300Erwinia pyrifoliae Ep1/96, complete genomeTransposase, orf A4e-0650.4
NC_012214:1650523:165875516587551659054300Erwinia pyrifoliae Ep1/96, complete genomeTransposase IS3/IS911, orf A4e-0650.4
NC_012214:1212616:122482812248281225127300Erwinia pyrifoliae Ep1/96, complete genomeTransposase IS3/IS911, orf A4e-0650.4
NC_012214:1355500:136718113671811367480300Erwinia pyrifoliae Ep1/96, complete genomeTransposase IS3/IS911, probable orf A1e-0548.9
NC_012214:2221702:226192422619242262223300Erwinia pyrifoliae Ep1/96, complete genomeTransposase IS3/IS911, probale orf A1e-0548.9