Pre_GI: BLASTP Hits

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Query: NC_010102:4477836:4485752 Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,

Start: 4485752, End: 4486126, Length: 375

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (SGSC 4150; ATCC BAA-1250) was isolated from a stool sample of an infected woman in Penang, Malaysia, May 16, 2002. This strain is susceptible to antibiotics, and was classified as serovar Paratyphi B because it was unable to metabolize D-tartrate. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015761:4188250:4202401420240142043801980Salmonella bongori NCTC 12419, complete genomeABC transporter ATP-binding protein2e-26117
NC_010067:3204682:3221562322156232235321971Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein5e-23106
NC_016831:4367000:437529343752934375475183Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein6e-2095.9
NC_011094:4442478:445033344503334450515183Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein6e-1785.9
NC_011149:4474012:448186544818654482047183Salmonella enterica subsp. enterica serovar Agona str. SL483,hypothetical protein6e-1785.9
NC_011083:4547825:455564645556464555828183Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,hypothetical protein6e-1785.9
NC_011080:4543000:455085745508574551039183Salmonella enterica subsp. enterica serovar Newport str. SL254,hypothetical protein3e-1683.6
NC_013508:343617:3582713582713602381968Edwardsiella tarda EIB202, complete genomeputative type I secretion protein1e-1271.6