Pre_GI: BLASTP Hits

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Query: NC_010102:4477836:4485547 Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,

Start: 4485547, End: 4485684, Length: 138

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (SGSC 4150; ATCC BAA-1250) was isolated from a stool sample of an infected woman in Penang, Malaysia, May 16, 2002. This strain is susceptible to antibiotics, and was classified as serovar Paratyphi B because it was unable to metabolize D-tartrate. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015761:4188250:4188250418825041978439594Salmonella bongori NCTC 12419, complete genomelarge repetitive protein3e-1477
NC_006905:4486433:449414444941444494533390Salmonella enterica subsp. enterica serovar Choleraesuis strputative cytoplasmic protein4e-1786.7
NC_016831:4367000:437489643748964375231336Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein4e-1786.7
NC_011147:4297513:430696643069664307280315Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein3e-1580.9
NC_012125:4481808:448951944895194489854336Salmonella enterica subsp. enterica serovar Paratyphi C straincytoplasmic protein5e-1786.3
NC_003198:4397074:440447844044784404861384Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein2e-1581.3
NC_016832:4368948:437635243763524376615264Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein2e-0651.6
NC_004631:4381724:438912843891284389511384Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein2e-1581.3
NC_016810:4573172:458066345806634580932270Salmonella enterica subsp. enterica serovar Typhimurium strbacteriophage protein9e-1475.5
NC_016856:4563435:457291345729134573182270Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Shypothetical protein9e-1475.5
NC_016857:4573173:458066445806644580933270Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74hypothetical protein9e-1475.5
NC_016863:4513106:452051945205194520788270Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1hypothetical protein9e-1475.5
NC_003197:4551880:456008345600834560352270Salmonella typhimurium LT2, complete genomehypothetical protein9e-1475.5