Pre_GI: BLASTP Hits

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Query: NC_010102:4396500:4403163 Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,

Start: 4403163, End: 4403303, Length: 141

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (SGSC 4150; ATCC BAA-1250) was isolated from a stool sample of an infected woman in Penang, Malaysia, May 16, 2002. This strain is susceptible to antibiotics, and was classified as serovar Paratyphi B because it was unable to metabolize D-tartrate. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016857:4491976:449850044985004498640141Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74hypothetical protein6e-1889.4
NC_016832:4288980:429551642955164295656141Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein6e-1889.4
NC_011080:4461851:446837544683754468515141Salmonella enterica subsp. enterica serovar Newport str. SL254,hypothetical protein2e-1787.8
NC_011083:4466634:447315844731584473298141Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,hypothetical protein2e-1787.8
NC_011149:4390315:439683943968394396979141Salmonella enterica subsp. enterica serovar Agona str. SL483,hypothetical protein3e-1580.5
NC_011094:4361238:436776243677624367902141Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein7e-1579.3
NC_016831:4286000:429268642926864292826141Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein9e-1579
NC_011205:4486142:449266644926664492806141Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein1e-1478.2