Pre_GI: BLASTP Hits

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Query: NC_010102:3955479:3974224 Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,

Start: 3974224, End: 3975264, Length: 1041

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (SGSC 4150; ATCC BAA-1250) was isolated from a stool sample of an infected woman in Penang, Malaysia, May 16, 2002. This strain is susceptible to antibiotics, and was classified as serovar Paratyphi B because it was unable to metabolize D-tartrate. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011294:3880500:3899988389998839010281041Salmonella enterica subsp. enterica serovar Enteritidis strTMAO reductase system periplasmic protein TorT0633
NC_003197:4005857:4025332402533240263721041Salmonella typhimurium LT2, complete genomeperiplasmic sensor2e-180631
NC_016810:4027170:4046645404664540476851041Salmonella enterica subsp. enterica serovar Typhimurium strSolute binding receptor protein2e-180631
NC_016856:4019549:4039024403902440400641041Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Speriplasmic sensory protein associated with the TorRS two-component regulatory system2e-180631
NC_016857:4025767:4046646404664640476861041Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74periplasmic sensory protein associated with the TorRS two-component regulatory system2e-180631
NC_016860:4110968:4130443413044341314831041Salmonella enterica subsp. enterica serovar Typhimurium strTMAO reductase system periplasmic protein TorT2e-180631
NC_016863:3967156:3986631398663139876711041Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1TMAO reductase system periplasmic protein TorT2e-180631
NC_011147:3789696:3809074380907438101141041Salmonella enterica subsp. enterica serovar Paratyphi A strTMAO reductase system periplasmic protein TorT4e-177620
NC_006511:3794017:3813395381339538144351041Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCSolute binding receptor protein4e-177620
NC_011094:3887648:3907122390712239081621041Salmonella enterica subsp. enterica serovar Schwarzengrund strTMAO reductase system periplasmic protein TorT1e-176619
NC_011083:4020000:4039539403953940405791041Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,tmao reductase system periplasmic protein tort2e-176618
NC_011080:3976441:3995915399591539969551041Salmonella enterica subsp. enterica serovar Newport str. SL254,tmao reductase system periplasmic protein tort2e-176618
NC_011149:3930358:3949824394982439508641041Salmonella enterica subsp. enterica serovar Agona str. SL483,tmao reductase system periplasmic protein tort6e-176617
NC_011205:4038884:4058378405837840594181041Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853TMAO reductase system periplasmic protein TorT2e-175615
NC_015761:3698520:3717575371757537186151041Salmonella bongori NCTC 12419, complete genomeSolute binding receptor protein3e-166584
NC_016831:3779611:378242537824253783357933Salmonella enterica subsp. enterica serovar Gallinarum/pullorum5e-150530
NC_011601:1077548:1089018108901810900461029Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeTMAO reductase system periplasmic protein TorT7e-119427
NC_017046:4025998:404579940457994046521723Salmonella enterica subsp. enterica serovar Typhimurium str. 798Solute binding receptor protein2e-118425
NC_012779:305969:3059693059693070031035Edwardsiella ictaluri 93-146, complete genometmao reductase system periplasmic protein tort, putative3e-109395
NC_017046:4025998:404547340454734045784312Salmonella enterica subsp. enterica serovar Typhimurium str. 798Solute binding receptor protein5e-55214
NC_011894:3319856:3346379334637933474491071Methylobacterium nodulans ORS 2060, complete genomeperiplasmic binding protein/LacI transcriptional regulator3e-43176
NC_011662:2320100:2320100232010023211731074Thauera sp. MZ1T, complete genomeperiplasmic binding protein/LacI transcriptional regulator2e-36153
NC_009952:2381601:240851724085172409482966Dinoroseobacter shibae DFL 12, complete genomeperiplasmic binding protein1e-30134
NC_016614:686887:702059702059702937879Vibrio sp. EJY3 chromosome 2, complete sequenceD-ribose transporter subunit RbsB1e-0654.3