Pre_GI: BLASTP Hits

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Query: NC_010102:3955479:3972235 Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,

Start: 3972235, End: 3973419, Length: 1185

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (SGSC 4150; ATCC BAA-1250) was isolated from a stool sample of an infected woman in Penang, Malaysia, May 16, 2002. This strain is susceptible to antibiotics, and was classified as serovar Paratyphi B because it was unable to metabolize D-tartrate. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017046:4025998:4043494404349440446781185Salmonella enterica subsp. enterica serovar Typhimurium str. 798cytochrome c-type protein0791
NC_006905:3942753:3962360396236039635441185Salmonella enterica subsp. enterica serovar Choleraesuis strtrimethylamine N-oxide reductase, cytochrome c-type subunit, also has activity as negativer regulator of tor operon0791
NC_006511:3794017:3811416381141638126001185Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein0791
NC_011083:4020000:4037560403756040387441185Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,cytochrome c-type protein torC0791
NC_003197:4005857:4023353402335340245371185Salmonella typhimurium LT2, complete genometrimethylamine N-oxide reductase cytochrome c-like subunit0791
NC_011094:3887648:3905143390514339063271185Salmonella enterica subsp. enterica serovar Schwarzengrund strtrimethylamine-N-oxide reductase c-type cytochrome TorC0791
NC_011147:3789696:3807095380709538082791185Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein0791
NC_011205:4038884:4056399405639940575831185Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853trimethylamine-N-oxide reductase c-type cytochrome TorC0791
NC_011294:3880500:3898009389800938991931185Salmonella enterica subsp. enterica serovar Enteritidis strcytochrome c-type protein0791
NC_016810:4027170:4044666404466640458501185Salmonella enterica subsp. enterica serovar Typhimurium strcytochrome c-type protein0791
NC_016856:4019549:4037045403704540382291185Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Strimethylamine N-oxide reductase cytochrome c-like subunit0791
NC_016857:4025767:4044667404466740458511185Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74trimethylamine N-oxide reductase cytochrome c-like subunit0791
NC_016860:4110968:4128464412846441296481185Salmonella enterica subsp. enterica serovar Typhimurium strcytochrome c-type protein0791
NC_016863:3967156:3984652398465239858361185Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1trimethylamine N-oxide reductase cytochrome c-like subunit0791
NC_011274:3799696:3799696379969638008801185Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91cytochrome c-type protein0789
NC_011149:3930358:3947845394784539490291185Salmonella enterica subsp. enterica serovar Agona str. SL483,trimethylamine-N-oxide reductase c-type cytochrome TorC0789
NC_010067:3753971:3754047375404737552311185Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein0788
NC_011080:3976441:3993936399393639951201185Salmonella enterica subsp. enterica serovar Newport str. SL254,trimethylamine-N-oxide reductase c-type cytochrome TorC0787
NC_004631:3809678:3809678380967838108621185Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein0786
NC_016832:3798475:3798475379847537996591185Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Cytochrome c-type protein torC0785
NC_015761:3698520:3715596371559637167801185Salmonella bongori NCTC 12419, complete genomecytochrome c-type protein0780
NC_011601:1077548:1090841109084110920131173Escherichia coli O127:H6 str. E2348/69 chromosome, complete genometrimethylamine N-oxide (TMAO) reductase I, cytochrome c-type subunit0712
NC_007643:1504758:1510692151069215118701179Rhodospirillum rubrum ATCC 11170, complete genomeMembrane-bound tetrahaem cytochrome TorC/YecK6e-90331
NC_008258:1934479:1957641195764119587411101Shigella flexneri 5 str. 8401, complete genomeputative cytochrome C-type protein3e-52206
NC_007384:1320287:1320287132028713213871101Shigella sonnei Ss046, complete genomeputative cytochrome C-type protein4e-52205
NC_016822:1304398:1304398130439813054981101Shigella sonnei 53G, complete genomeNapC/NirT cytochrome c domain protein5e-52205
NC_011415:2153243:2172917217291721740171101Escherichia coli SE11 chromosome, complete genomecytochrome c-type protein6e-52205
NC_007298:2769525:277674427767442777319576Dechloromonas aromatica RCB, complete genomeNapC/NirT cytochrome c, N-terminal1e-41171
NC_016616:134449:146461146461147036576Dechlorosoma suillum PS chromosome, complete genomenitrate/TMAO reductase, membrane-bound tetraheme cytochrome c subunit2e-41170
NC_014837:3126543:314063631406363141220585Pantoea sp. At-9b chromosome, complete genomeperiplasmic nitrate (or nitrite) reductase c-type cytochrome, NapC/NirT family4e-41169
NC_013421:2972269:297674629767462977348603Pectobacterium wasabiae WPP163, complete genomeperiplasmic nitrate (or nitrite) reductase c-type cytochrome, NapC/NirT family2e-40166
NC_010067:632683:641974641974642576603Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein2e-40166
NC_011205:2462025:247484524748452475447603Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853cytochrome c-type protein NapC6e-40165
NC_011147:682897:691017691017691619603Salmonella enterica subsp. enterica serovar Paratyphi A strcytochrome c-type protein NapC6e-40165
NC_011094:2348491:235946123594612360063603Salmonella enterica subsp. enterica serovar Schwarzengrund strcytochrome c-type protein NapC6e-40165
NC_011083:2375061:240126324012632401865603Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,cytochrome c-type protein napC6e-40165
NC_011149:2294500:230516623051662305768603Salmonella enterica subsp. enterica serovar Agona str. SL483,cytochrome c-type protein napC6e-40165
NC_003197:2327474:235368323536832354285603Salmonella typhimurium LT2, complete genomeperiplasmic nitrate reductase6e-40165
NC_011080:2342672:235545523554552356057603Salmonella enterica subsp. enterica serovar Newport str. SL254,cytochrome c-type protein napC6e-40165
NC_006905:2355290:236796723679672368569603Salmonella enterica subsp. enterica serovar Choleraesuis strperiplasmic nitrate reductase, cytochrome c-type protein6e-40165
NC_006511:682863:690983690983691585603Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCcytochrome c-type protein NapC6e-40165
NC_010102:683444:691538691538692140603Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein6e-40165
NC_011294:2334979:234777823477782348380603Salmonella enterica subsp. enterica serovar Enteritidis strcytochrome c-type protein NapC6e-40165
NC_012125:1517925:152604515260451526647603Salmonella enterica subsp. enterica serovar Paratyphi C straincytochrome c-type protein NapC6e-40165
NC_016810:2325190:235139923513992352001603Salmonella enterica subsp. enterica serovar Typhimurium strcytochrome c-type protein NapC6e-40165
NC_016832:687000:693431693431694033603Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Cytochrome c-type protein NapC5e-40165
NC_004631:685357:693477693477694079603Salmonella enterica subsp. enterica serovar Typhi Ty2, completecytochrome c-type protein NapC5e-40165
NC_003198:2297837:231063423106342311236603Salmonella enterica subsp. enterica serovar Typhi str. CT18,cytochrome c-type protein NapC5e-40165
NC_011274:2325840:233864723386472339249603Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91cytochrome c-type protein NapC5e-40165
NC_017046:2324554:235076323507632351365603Salmonella enterica subsp. enterica serovar Typhimurium str. 798cytochrome c-type protein NapC6e-40165
NC_016863:2324293:235342823534282354030603Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1cytochrome c-type protein NapC6e-40165
NC_016860:2323017:234922623492262349828603Salmonella enterica subsp. enterica serovar Typhimurium strcytochrome c-type protein NapC6e-40165
NC_016857:2325190:235139923513992352001603Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74cytochrome c-type protein NapC6e-40165
NC_016856:2379027:240523624052362405838603Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Scytochrome c-type protein NapC6e-40165
NC_016831:687549:695643695643696245603Salmonella enterica subsp. enterica serovar Gallinarum/pullorumcytochrome c-type protein NapC6e-40165
NC_015761:2227500:223646822364682237070603Salmonella bongori NCTC 12419, complete genomecytochrome c-type protein NapC1e-39164
NC_010634:3155741:317603531760353176634600Yersinia pseudotuberculosis PB1/+, complete genomeNapC/NirT family periplasmic nitrate (or nitrite) reductase c-type cytochrome5e-39162
NC_006155:3237990:325852432585243259123600Yersinia pseudotuberculosis IP 32953, complete genomecytochrome C-type protein NapC5e-39162
NC_008321:2190000:219347121934712194058588Shewanella sp. MR-4, complete genomeperiplasmic nitrate (or nitrite) reductase c-type cytochrome, NapC/NirT family1e-38161
NC_007645:3434795:345284934528493453442594Hahella chejuensis KCTC 2396, complete genomeNitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit1e-35150
NC_009430:16500:169521695217620669Rhodobacter sphaeroides ATCC 17025 plasmid pRSPA02, completehypothetical protein6e-33142
NC_010511:1122529:113388911338891134503615Methylobacterium sp. 4-46 chromosome, complete genomeNapC/NirT cytochrome c domain-containing protein8e-33141
NC_003198:3824187:3824187382418738253721186Salmonella enterica subsp. enterica serovar Typhi str. CT18,3e-32139
NC_017075:2293209:230930223093022309898597Rubrivivax gelatinosus IL144, complete genomeNapC/NirT cytochrome c domain protein1e-30134
NC_012039:1399699:140366714036671404245579Campylobacter lari RM2100, complete genometrimethylamine N-oxide reductase, cytochrome c-type subunit6e-1892
NC_014761:2189500:221579022157902216521732Oceanithermus profundus DSM 14977 chromosome, complete genomecytochrome c-type protein torc7e-1788.6
NC_009715:905134:906427906427907005579Campylobacter curvus 525.92 chromosome, complete genomeputative cytochrome C-type heme-binding periplasmic protein4e-1686.3
NC_009850:1131492:114350811435081144101594Arcobacter butzleri RM4018, complete genomecytochrome c-type protein TorC2e-1584
NC_004757:1021355:104445910444591045160702Nitrosomonas europaea ATCC 19718, complete genomeputative tetraheme c-cytochrome2e-1584
NC_009715:905134:912383912383912979597Campylobacter curvus 525.92 chromosome, complete genomeputative cytochrome C-type heme-binding periplasmic protein6e-1582
NC_015222:2089767:210473521047352105424690Nitrosomonas sp. AL212 chromosome, complete genomeNapC/NirT cytochrome c domain-containing protein2e-1480.9
NC_015222:1749553:175846517584651759154690Nitrosomonas sp. AL212 chromosome, complete genomeNapC/NirT cytochrome c domain-containing protein2e-1480.9
NC_015731:867377:908518908518909192675Nitrosomonas sp. Is79A3 chromosome, complete genomeNapC/NirT cytochrome c domain-containing protein1e-1377.8
NC_015731:867377:886369886369887043675Nitrosomonas sp. Is79A3 chromosome, complete genomeNapC/NirT cytochrome c domain-containing protein3e-1376.6
NC_020409:1328875:133022613302261330813588Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completecytochrome c nitrite reductase, small subuinit (4 hemes)7e-1065.5
NC_013385:1882549:189539618953961895920525Ammonifex degensii KC4, complete genomecytochrome c nitrate reductase, small subunit1e-0964.3