Pre_GI: BLASTP Hits

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Query: NC_010102:3955479:3959521 Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,

Start: 3959521, End: 3959853, Length: 333

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (SGSC 4150; ATCC BAA-1250) was isolated from a stool sample of an infected woman in Penang, Malaysia, May 16, 2002. This strain is susceptible to antibiotics, and was classified as serovar Paratyphi B because it was unable to metabolize D-tartrate. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015761:3698520:370164937016493702059411Salmonella bongori NCTC 12419, complete genomelipoprotein2e-46183
NC_010067:3753971:376765337676533767985333Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein2e-45181
NC_011149:3930358:393517339351733935463291Salmonella enterica subsp. enterica serovar Agona str. SL483,conserved outer membrane protein5e-42169
NC_006905:3942753:395167839516783951938261Salmonella enterica subsp. enterica serovar Choleraesuis strputative outer membrane lipoprotein3e-36150
NC_011205:4038884:404370640437064043996291Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein2e-41167
NC_011294:3880500:388529238852923885627336Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein1e-49194
NC_011274:3799696:381327038132703813605336Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein1e-48191
NC_016831:3779611:379409237940923794382291Salmonella enterica subsp. enterica serovar Gallinarum/pullorumputative lipoprotein2e-40164
NC_011083:4020000:402491840249184025178261Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,conserved outer membrane protein3e-36150
NC_011080:3976441:398129439812943981554261Salmonella enterica subsp. enterica serovar Newport str. SL254,conserved outer membrane protein3e-36150
NC_011147:3789696:379447337944733794808336Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein5e-50196
NC_006511:3794017:379879437987943799129336Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCputative lipoprotein5e-50196
NC_012125:3941974:394647239464723946732261Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein3e-36150
NC_011094:3887648:389247138924713892761291Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein2e-41167
NC_003198:3824187:383775438377543838089336Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative lipoprotein1e-49194
NC_016832:3798475:381204138120413812331291Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein2e-41167
NC_004631:3809678:382324438232443823579336Salmonella enterica subsp. enterica serovar Typhi Ty2, completeputative lipoprotein1e-49194
NC_016810:4027170:403194940319494032284336Salmonella enterica subsp. enterica serovar Typhimurium strputative lipoprotein3e-50196
NC_016860:4110968:411579241157924116082291Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein5e-42169
NC_016856:4019549:402432840243284024663336Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Shypothetical protein3e-50196
NC_017046:4025998:403085240308524031112261Salmonella enterica subsp. enterica serovar Typhimurium str. 798lipoprotein3e-36150
NC_016857:4025767:403195040319504032285336Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative outer membrane lipoprotein3e-50196
NC_016863:3967156:397193539719353972270336Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1hypothetical protein3e-50196
NC_003197:4005857:401063640106364010971336Salmonella typhimurium LT2, complete genomeputative outer membrane lipoprotein3e-50196
NC_004337:3590323:388472038847203885127408Shigella flexneri 2a str. 301, complete genomehypothetical protein2e-41167