Pre_GI: BLASTP Hits

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Query: NC_010102:3955479:3955479 Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,

Start: 3955479, End: 3955715, Length: 237

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (SGSC 4150; ATCC BAA-1250) was isolated from a stool sample of an infected woman in Penang, Malaysia, May 16, 2002. This strain is susceptible to antibiotics, and was classified as serovar Paratyphi B because it was unable to metabolize D-tartrate. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012125:3941974:394175339417533941989237Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein4e-38156
NC_011274:3799696:3815052381505238170281977Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein4e-31133
NC_011205:4038884:404023040402304040523294Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein8e-22102
NC_016832:3798475:381551938155193815653135Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein2e-1684.3